Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10128211	0.88[AFR][1000 genomes]
rs10764340	0.86[AFR][1000 genomes]
rs1539681	0.82[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1757220	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1757223	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1779208	0.85[ASN][1000 genomes]
rs1779211	0.82[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs1779214	0.88[ASN][1000 genomes]
rs1779215	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1779216	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1936442	0.84[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs2489200	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2489201	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7893163	0.80[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs7896607	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7905454	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7914364	0.96[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs7915367	0.84[AFR][1000 genomes]
rs7917760	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7924114	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3416896	chr10:18508246-18510294	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18499200-18511000	Weak transcription	Aorta	Aorta
2	chr10:18502400-18513600	Weak transcription	Right Ventricle	heart
3	chr10:18504400-18510400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr10:18504800-18513400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr10:18505400-18513400	Weak transcription	Colon Smooth Muscle	Colon
6	chr10:18506000-18512800	Weak transcription	Fetal Lung	lung
7	chr10:18506200-18513600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr10:18506800-18513600	Weak transcription	Pancreas	Pancrea
9	chr10:18507000-18513600	Weak transcription	Ovary	ovary
10	chr10:18508600-18511800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr10:18508600-18513000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr10:18508800-18511800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:18508800-18512400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr10:18508800-18513200	Weak transcription	Brain Anterior Caudate	brain
15	chr10:18509600-18510200	Enhancers	Stomach Smooth Muscle	stomach
16	chr10:18509600-18511400	Enhancers	Fetal Heart	heart
17	chr10:18509800-18513600	Weak transcription	H1 Cell Line	embryonic stem cell

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