The 2.0 version of rSNPBase

Variant report

Variant rs17671485
Chromosome Location chr14:55308399-55308400
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55301000-55310000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr14:55303400-55337000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr14:55304800-55309200 Weak transcription Duodenum Mucosa Duodenum
4 chr14:55305000-55320400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr14:55305200-55312200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr14:55305200-55337200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr14:55305400-55314000 Weak transcription Primary hematopoietic stem cells blood
8 chr14:55305400-55325800 Weak transcription Spleen Spleen
9 chr14:55305600-55313200 Strong transcription Primary T cells from cord blood blood
10 chr14:55305800-55308800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr14:55305800-55313000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr14:55305800-55313200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr14:55305800-55313600 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr14:55305800-55321000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr14:55305800-55326400 Weak transcription Fetal Thymus thymus
16 chr14:55306000-55308600 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr14:55306000-55308600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
18 chr14:55306000-55309000 Weak transcription Right Ventricle heart
19 chr14:55306000-55314200 Strong transcription Primary monocytes fromperipheralblood blood
20 chr14:55306200-55309400 Enhancers Liver Liver
21 chr14:55306200-55320800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr14:55306200-55337000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr14:55306400-55309800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr14:55306400-55311200 Strong transcription Primary T regulatory cells fromperipheralblood blood
25 chr14:55306400-55311400 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr14:55306400-55312800 Weak transcription Gastric stomach
27 chr14:55306400-55336800 Weak transcription Dnd41 blood
28 chr14:55306600-55321000 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr14:55306600-55336600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr14:55306800-55309200 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr14:55306800-55327400 Weak transcription Pancreas Pancrea
32 chr14:55306800-55337000 Weak transcription Brain Anterior Caudate brain
33 chr14:55307000-55310200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr14:55307000-55312400 Weak transcription Stomach Mucosa stomach
35 chr14:55307000-55313400 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr14:55307200-55308600 Strong transcription Fetal Intestine Small intestine
37 chr14:55307200-55309800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr14:55307200-55309800 Strong transcription GM12878-XiMat blood
39 chr14:55307200-55313000 Strong transcription Primary T cells fromperipheralblood blood
40 chr14:55307400-55309600 Weak transcription Aorta Aorta
41 chr14:55307400-55309800 Weak transcription Fetal Muscle Leg muscle
42 chr14:55307400-55309800 Weak transcription Fetal Stomach stomach
43 chr14:55307400-55310200 Strong transcription Primary B cells from peripheral blood blood
44 chr14:55307600-55308400 Strong transcription Primary B cells from cord blood blood
45 chr14:55307600-55309800 Strong transcription Primary T helper naive cells from peripheral blood blood
46 chr14:55307800-55309400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr14:55307800-55310200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr14:55308000-55308400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr14:55308000-55308400 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr14:55308000-55308600 Enhancers H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015