The 2.0 version of rSNPBase

Variant report

Variant rs28678578
Chromosome Location chr14:55427226-55427227
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55394200-55443000 Weak transcription HSMMtube muscle
2 chr14:55394400-55428800 Weak transcription HSMM muscle
3 chr14:55402000-55427600 Weak transcription Fetal Brain Female brain
4 chr14:55403000-55449000 Weak transcription Gastric stomach
5 chr14:55403200-55442600 Weak transcription NHEK skin
6 chr14:55403200-55442800 Weak transcription NHDF-Ad bronchial
7 chr14:55403600-55428600 Weak transcription HUVEC blood vessel
8 chr14:55404400-55427600 Weak transcription Primary T cells from cord blood blood
9 chr14:55407400-55442800 Weak transcription Muscle Satellite Cultured Cells --
10 chr14:55407600-55427800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr14:55408400-55429200 Weak transcription Fetal Lung lung
12 chr14:55410000-55427800 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr14:55411000-55477000 Weak transcription Left Ventricle heart
14 chr14:55412200-55427600 Weak transcription Duodenum Mucosa Duodenum
15 chr14:55412400-55453400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr14:55412600-55433600 Weak transcription HepG2 liver
17 chr14:55413600-55429400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr14:55414000-55433800 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr14:55414400-55429800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr14:55415200-55450000 Weak transcription Placenta Amnion Placenta Amnion
21 chr14:55415400-55427600 Weak transcription Fetal Intestine Large intestine
22 chr14:55415400-55443000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr14:55415600-55427600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr14:55415600-55427800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr14:55415600-55428800 Weak transcription Hela-S3 cervix
26 chr14:55415800-55427600 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr14:55415800-55427600 Weak transcription Fetal Muscle Trunk muscle
28 chr14:55415800-55427600 Weak transcription A549 lung
29 chr14:55416000-55427400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr14:55416000-55442600 Weak transcription Primary monocytes fromperipheralblood blood
31 chr14:55417400-55428800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr14:55418600-55492200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr14:55419400-55442800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr14:55419400-55443000 Weak transcription NH-A brain
35 chr14:55419800-55480400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr14:55420000-55471600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr14:55420200-55431400 Weak transcription Small Intestine intestine
38 chr14:55420200-55435200 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr14:55420400-55435600 Strong transcription HUES48 Cell Line embryonic stem cell
40 chr14:55420600-55428000 Weak transcription Brain Germinal Matrix brain
41 chr14:55420600-55429200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr14:55420600-55434000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr14:55420600-55434600 Strong transcription H1 Cell Line embryonic stem cell
44 chr14:55420600-55434800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr14:55420600-55434800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr14:55420600-55435000 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr14:55420600-55435000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr14:55420600-55435200 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr14:55420600-55435400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr14:55420600-55435800 Strong transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015