Variant report
| Variant | rs17698419 |
|---|---|
| Chromosome Location | chr11:16883672-16883673 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:16853400-16883800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 2 | chr11:16863800-16884800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 3 | chr11:16863800-16892600 | Weak transcription | Fetal Kidney | kidney |
| 4 | chr11:16867800-16885000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 5 | chr11:16872000-16895800 | Weak transcription | Aorta | Aorta |
| 6 | chr11:16872200-16884400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr11:16872600-16889600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 8 | chr11:16872800-16883800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 9 | chr11:16876000-16883800 | Weak transcription | Fetal Brain Female | brain |
| 10 | chr11:16876200-16888400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr11:16876600-16884000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 12 | chr11:16876600-16889800 | Weak transcription | Adipose Nuclei | Adipose |
| 13 | chr11:16876600-16890800 | Weak transcription | Colonic Mucosa | Colon |
| 14 | chr11:16876800-16898600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 15 | chr11:16877800-16883800 | Weak transcription | Brain Germinal Matrix | brain |
| 16 | chr11:16877800-16890000 | Weak transcription | Lung | lung |
| 17 | chr11:16877800-16892200 | Weak transcription | Fetal Stomach | stomach |
| 18 | chr11:16877800-16899600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 19 | chr11:16878000-16889400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 20 | chr11:16878200-16883800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 21 | chr11:16878800-16890000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 22 | chr11:16879000-16884200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 23 | chr11:16879000-16887600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 24 | chr11:16879200-16884000 | Weak transcription | Liver | Liver |
| 25 | chr11:16879400-16885000 | Enhancers | K562 | blood |
| 26 | chr11:16880400-16883800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 27 | chr11:16880400-16885200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 28 | chr11:16880400-16885800 | Enhancers | Fetal Muscle Leg | muscle |
| 29 | chr11:16881000-16884600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr11:16881800-16885200 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 31 | chr11:16882200-16883800 | Weak transcription | Right Atrium | heart |
| 32 | chr11:16882200-16884800 | Enhancers | Brain Anterior Caudate | brain |
| 33 | chr11:16882200-16888400 | Weak transcription | HMEC | breast |
| 34 | chr11:16882200-16888600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 35 | chr11:16882400-16884400 | Weak transcription | Esophagus | oesophagus |
| 36 | chr11:16882400-16884800 | Weak transcription | Psoas Muscle | Psoas |
| 37 | chr11:16882400-16889200 | Weak transcription | HepG2 | liver |
| 38 | chr11:16882400-16894800 | Weak transcription | Pancreas | Pancrea |
| 39 | chr11:16882400-16895800 | Weak transcription | Gastric | stomach |
| 40 | chr11:16882600-16884600 | Enhancers | Fetal Heart | heart |
| 41 | chr11:16882600-16885000 | Weak transcription | Fetal Intestine Large | intestine |
| 42 | chr11:16882600-16898400 | Weak transcription | Ovary | ovary |
| 43 | chr11:16883000-16884600 | Strong transcription | Fetal Intestine Small | intestine |
| 44 | chr11:16883000-16885200 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 45 | chr11:16883000-16885400 | Enhancers | Fetal Muscle Trunk | muscle |
| 46 | chr11:16883000-16889600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 47 | chr11:16883200-16883800 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 48 | chr11:16883200-16884400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 49 | chr11:16883200-16885000 | Enhancers | Brain Cingulate Gyrus | brain |
| 50 | chr11:16883400-16883800 | Bivalent Enhancer | Cortex derived primary cultured neurospheres | brain |
