The 2.0 version of rSNPBase

Variant report

Variant rs17732745
Chromosome Location chr6:149815782-149815783
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:149804400-149824600 Weak transcription Brain Hippocampus Middle brain
2 chr6:149806400-149832000 Weak transcription HSMMtube muscle
3 chr6:149806400-149844800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:149806800-149825200 Weak transcription HSMM muscle
5 chr6:149806800-149832400 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr6:149807000-149832200 Weak transcription Lung lung
7 chr6:149807000-149849000 Weak transcription Gastric stomach
8 chr6:149807200-149824800 Weak transcription Primary monocytes fromperipheralblood blood
9 chr6:149807200-149832000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr6:149807200-149835000 Weak transcription Spleen Spleen
11 chr6:149807200-149842600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr6:149810200-149819800 Weak transcription Fetal Muscle Trunk muscle
13 chr6:149810400-149821200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr6:149810800-149851600 Weak transcription Esophagus oesophagus
15 chr6:149811200-149860600 Weak transcription Aorta Aorta
16 chr6:149811400-149826600 Weak transcription Fetal Intestine Small intestine
17 chr6:149813200-149818000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:149813800-149816200 Enhancers Primary T cells fromperipheralblood blood
19 chr6:149813800-149816400 Enhancers Primary T regulatory cells fromperipheralblood blood
20 chr6:149813800-149817000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr6:149814000-149816000 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr6:149814000-149816200 Enhancers Primary T cells from cord blood blood
23 chr6:149814000-149816400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr6:149814000-149816400 Enhancers Primary T helper cells PMA-I stimulated --
25 chr6:149814000-149816400 Enhancers Primary T helper cells fromperipheralblood blood
26 chr6:149814000-149816400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:149814000-149816600 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr6:149814000-149817600 Enhancers Primary B cells from cord blood blood
29 chr6:149814000-149818200 Enhancers Primary B cells from peripheral blood blood
30 chr6:149814000-149818800 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr6:149814000-149818800 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr6:149814200-149817600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr6:149814400-149815800 Enhancers HepG2 liver
34 chr6:149814800-149825200 Weak transcription Fetal Thymus thymus
35 chr6:149815000-149819800 Weak transcription Stomach Mucosa stomach
36 chr6:149815200-149817000 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr6:149815200-149825600 Weak transcription Duodenum Mucosa Duodenum
38 chr6:149815600-149815800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
39 chr6:149815600-149815800 Flanking Active TSS GM12878-XiMat blood
40 chr6:149815600-149816000 Enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr6:149815600-149824800 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr6:149815600-149845000 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015