Variant report

Variant	rs17775102
Chromosome Location	chr7:14402280-14402281
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1019906	0.85[CHB][hapmap];0.80[JPT][hapmap];1.00[YRI][hapmap]
rs10755842	0.81[JPT][hapmap]
rs11977804	0.94[CHB][hapmap]
rs17168097	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs17168106	0.95[CHB][hapmap]
rs17168109	0.94[CHB][hapmap]
rs2116532	0.81[JPT][hapmap]
rs2217572	0.80[JPT][hapmap]
rs4721330	0.94[CHB][hapmap];0.81[JPT][hapmap]
rs6958890	0.84[CHB][hapmap];0.86[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv606281	chr7:14388381-14443963	Weak transcription Flanking Active TSS Enhancers Active TSS	n/a	n/a	inside rSNPs	diseases
3	nsv967428	chr7:14390125-14405382	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14402200-14404600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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