Variant report

Variant rs1781873
Chromosome Location chr19:21477431-21477432
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21465000-21496000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr19:21465400-21484600 ZNF genes & repeats Liver Liver
3 chr19:21467200-21489600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr19:21470600-21484200 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
5 chr19:21471200-21479800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
6 chr19:21471600-21479800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr19:21472000-21481800 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr19:21472200-21487600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr19:21472200-21490400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr19:21473600-21479400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
11 chr19:21473600-21479600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:21473600-21487200 Weak transcription Right Ventricle heart
13 chr19:21473800-21479600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
14 chr19:21473800-21510400 Weak transcription Fetal Heart heart
15 chr19:21474000-21478800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr19:21474000-21479200 ZNF genes & repeats Muscle Satellite Cultured Cells --
17 chr19:21474000-21481600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr19:21474000-21490600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
19 chr19:21474200-21478200 ZNF genes & repeats Fetal Brain Female brain
20 chr19:21474200-21478600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
21 chr19:21474200-21479600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:21474200-21480800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
23 chr19:21474200-21482000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr19:21474400-21478000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
25 chr19:21474400-21492400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr19:21474800-21478000 Weak transcription Ovary ovary
27 chr19:21474800-21509800 Weak transcription Fetal Brain Male brain
28 chr19:21475000-21480400 Weak transcription Placenta Placenta
29 chr19:21475200-21477800 Weak transcription Aorta Aorta
30 chr19:21475200-21478200 Weak transcription Fetal Intestine Small intestine
31 chr19:21475200-21478800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr19:21475200-21479800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
33 chr19:21475200-21481800 Weak transcription Pancreas Pancrea
34 chr19:21475200-21481800 ZNF genes & repeats Dnd41 blood
35 chr19:21475200-21483600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr19:21475200-21484000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr19:21475200-21484200 Weak transcription Fetal Thymus thymus
38 chr19:21475200-21485400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr19:21475200-21511200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr19:21475400-21478200 Weak transcription Esophagus oesophagus
41 chr19:21475400-21478200 Weak transcription Lung lung
42 chr19:21475600-21479200 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
43 chr19:21475600-21479200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
44 chr19:21475800-21478200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
45 chr19:21475800-21478200 ZNF genes & repeats Brain Substantia Nigra brain
46 chr19:21475800-21478200 ZNF genes & repeats HSMMtube muscle
47 chr19:21475800-21478600 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
48 chr19:21475800-21478600 ZNF genes & repeats Adipose Nuclei Adipose
49 chr19:21475800-21478800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
50 chr19:21475800-21479200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum

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