Variant report

Variant rs12984300
Chromosome Location chr19:21489003-21489004
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21465000-21496000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr19:21467200-21489600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr19:21472200-21490400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:21473800-21510400 Weak transcription Fetal Heart heart
5 chr19:21474000-21490600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
6 chr19:21474400-21492400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr19:21474800-21509800 Weak transcription Fetal Brain Male brain
8 chr19:21475200-21511200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr19:21476000-21490400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
10 chr19:21476000-21490400 Weak transcription Hela-S3 cervix
11 chr19:21476800-21497600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr19:21477000-21494400 Weak transcription Stomach Mucosa stomach
13 chr19:21477200-21495000 Weak transcription Brain Cingulate Gyrus brain
14 chr19:21477600-21495800 Weak transcription HepG2 liver
15 chr19:21478000-21497400 Weak transcription Colon Smooth Muscle Colon
16 chr19:21478200-21492600 Strong transcription Primary T helper naive cells fromperipheralblood blood
17 chr19:21478400-21500600 Weak transcription Psoas Muscle Psoas
18 chr19:21478600-21490600 Strong transcription Fetal Lung lung
19 chr19:21478600-21499200 Weak transcription HMEC breast
20 chr19:21480800-21490600 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr19:21481000-21500600 Weak transcription NHLF lung
22 chr19:21481200-21493000 Strong transcription Primary T helper naive cells from peripheral blood blood
23 chr19:21481600-21500000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr19:21481600-21500400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr19:21481600-21505600 Weak transcription K562 blood
26 chr19:21481800-21489800 ZNF genes & repeats Primary hematopoietic stem cells blood
27 chr19:21481800-21490600 ZNF genes & repeats Primary monocytes fromperipheralblood blood
28 chr19:21481800-21492600 Strong transcription Fetal Muscle Leg muscle
29 chr19:21481800-21493000 Strong transcription Dnd41 blood
30 chr19:21481800-21493400 Strong transcription Fetal Stomach stomach
31 chr19:21482000-21492400 Strong transcription Cortex derived primary cultured neurospheres brain
32 chr19:21482000-21493200 Strong transcription Fetal Muscle Trunk muscle
33 chr19:21482000-21493800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr19:21482200-21490400 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr19:21482400-21492800 Strong transcription HUES64 Cell Line embryonic stem cell
36 chr19:21482800-21489600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
37 chr19:21483000-21490000 Weak transcription NHEK skin
38 chr19:21483200-21492800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr19:21483400-21490600 Strong transcription Ovary ovary
40 chr19:21483600-21489600 Strong transcription Muscle Satellite Cultured Cells --
41 chr19:21483600-21493000 Strong transcription Primary B cells from peripheral blood blood
42 chr19:21483800-21489400 Strong transcription Brain Anterior Caudate brain
43 chr19:21483800-21489800 Strong transcription Osteobl bone
44 chr19:21483800-21490200 Strong transcription HSMM muscle
45 chr19:21484000-21490600 ZNF genes & repeats GM12878-XiMat blood
46 chr19:21484000-21492200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr19:21484200-21492200 Weak transcription Rectal Smooth Muscle rectum
48 chr19:21484200-21494200 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr19:21484400-21493200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
50 chr19:21484400-21511000 Weak transcription H9 Cell Line embryonic stem cell

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