The 2.0 version of rSNPBase

Variant report

Variant rs10405716
Chromosome Location chr19:21584364-21584365
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21580600-21585000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr19:21580600-21592600 Weak transcription Placenta Placenta
3 chr19:21580600-21593200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:21580600-21593600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr19:21580600-21600200 Weak transcription Gastric stomach
6 chr19:21580600-21602400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:21580800-21595400 Weak transcription HUVEC blood vessel
8 chr19:21581000-21584600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr19:21581000-21591800 Weak transcription Pancreas Pancrea
10 chr19:21581000-21596200 Weak transcription Aorta Aorta
11 chr19:21581000-21598800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:21581200-21590200 Weak transcription NHLF lung
13 chr19:21581400-21585200 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr19:21581400-21585400 Weak transcription Muscle Satellite Cultured Cells --
15 chr19:21581400-21585400 Weak transcription Colonic Mucosa Colon
16 chr19:21581400-21586200 Weak transcription Rectal Smooth Muscle rectum
17 chr19:21581400-21588400 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr19:21581400-21588600 Weak transcription Fetal Stomach stomach
19 chr19:21581400-21589000 Weak transcription K562 blood
20 chr19:21581400-21592000 Weak transcription NH-A brain
21 chr19:21581400-21594600 Weak transcription H9 Cell Line embryonic stem cell
22 chr19:21581400-21596800 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr19:21581400-21598800 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr19:21581600-21584600 Strong transcription HUES64 Cell Line embryonic stem cell
25 chr19:21581600-21585000 Weak transcription Fetal Heart heart
26 chr19:21581600-21585200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr19:21581600-21585200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr19:21581600-21585200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr19:21581600-21585200 Weak transcription Spleen Spleen
30 chr19:21581600-21585600 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr19:21581600-21585600 Weak transcription Duodenum Mucosa Duodenum
32 chr19:21581600-21585600 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr19:21581600-21588000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr19:21581600-21589000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr19:21581600-21590000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr19:21581600-21591800 Weak transcription Right Ventricle heart
37 chr19:21581600-21592200 Weak transcription Brain Inferior Temporal Lobe brain
38 chr19:21581600-21592400 Weak transcription Brain Angular Gyrus brain
39 chr19:21581600-21592400 Weak transcription Fetal Kidney kidney
40 chr19:21581600-21594600 Weak transcription HepG2 liver
41 chr19:21581600-21601800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr19:21581800-21588400 Weak transcription Small Intestine intestine
43 chr19:21581800-21588800 Weak transcription Placenta Amnion Placenta Amnion
44 chr19:21581800-21607000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr19:21582000-21585200 Weak transcription Ovary ovary
46 chr19:21582000-21586000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
47 chr19:21582000-21588400 Weak transcription Adipose Nuclei Adipose
48 chr19:21582200-21590800 Weak transcription Fetal Lung lung
49 chr19:21582400-21585400 Weak transcription Left Ventricle heart
50 chr19:21582600-21586200 Strong transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015