Variant report

Variant rs12980097
Chromosome Location chr19:21511106-21511107
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21475200-21511200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:21485400-21511200 Weak transcription Gastric stomach
3 chr19:21487600-21511200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr19:21488200-21511200 Weak transcription Aorta Aorta
5 chr19:21498400-21511200 Weak transcription Placenta Amnion Placenta Amnion
6 chr19:21501000-21511200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr19:21501000-21511200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr19:21501000-21511200 Weak transcription Psoas Muscle Psoas
9 chr19:21505000-21511200 Weak transcription Pancreas Pancrea
10 chr19:21507000-21511200 Weak transcription Colonic Mucosa Colon
11 chr19:21509400-21511200 Weak transcription Fetal Kidney kidney
12 chr19:21509400-21511200 Weak transcription Fetal Thymus thymus
13 chr19:21509400-21511200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr19:21509600-21511200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:21509600-21511200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr19:21509600-21511200 Weak transcription Esophagus oesophagus
17 chr19:21509600-21511200 Weak transcription Lung lung
18 chr19:21509800-21511200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr19:21509800-21512600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr19:21510000-21511200 Enhancers Primary T cells fromperipheralblood blood
21 chr19:21510000-21511200 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr19:21510200-21511200 Weak transcription Placenta Placenta
23 chr19:21510400-21511200 Enhancers Primary monocytes fromperipheralblood blood
24 chr19:21510400-21511200 Enhancers Primary B cells from peripheral blood blood
25 chr19:21510400-21511200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr19:21510400-21511200 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr19:21510400-21511200 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr19:21510400-21511200 Weak transcription Fetal Stomach stomach
29 chr19:21510400-21511400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
30 chr19:21510400-21511400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
31 chr19:21510400-21512600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr19:21510400-21512600 Active TSS Fetal Brain Female brain
33 chr19:21510600-21511200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
34 chr19:21510600-21511200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
35 chr19:21510600-21511200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
36 chr19:21510600-21511200 Enhancers Adipose Nuclei Adipose
37 chr19:21510600-21511200 Enhancers Duodenum Mucosa Duodenum
38 chr19:21510600-21511200 Enhancers Fetal Muscle Leg muscle
39 chr19:21510600-21511200 Enhancers Left Ventricle heart
40 chr19:21510600-21511200 Enhancers Right Ventricle heart
41 chr19:21510600-21511200 Enhancers Skeletal Muscle Male skeletal muscle
42 chr19:21510600-21511200 Enhancers Skeletal Muscle Female skeletal muscle
43 chr19:21510600-21511200 Enhancers Thymus Thymus
44 chr19:21510600-21511400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
45 chr19:21510600-21511400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr19:21510600-21511400 Flanking Active TSS Brain Hippocampus Middle brain
47 chr19:21510600-21511600 Flanking Active TSS Primary T cells from cord blood blood
48 chr19:21510600-21511600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr19:21510600-21511600 Enhancers Small Intestine intestine
50 chr19:21510600-21511800 Flanking Active TSS Primary B cells from cord blood blood

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