The 2.0 version of rSNPBase

Variant report

Variant rs17849168
Chromosome Location chr10:97165619-97165620
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97146800-97168400 Weak transcription Small Intestine intestine
2 chr10:97151000-97166200 Strong transcription Liver Liver
3 chr10:97151800-97168800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr10:97154400-97190800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr10:97154600-97168000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr10:97155400-97168000 Strong transcription Fetal Intestine Small intestine
7 chr10:97155400-97170800 Enhancers Right Atrium heart
8 chr10:97156000-97166200 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr10:97156800-97173400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr10:97156800-97182600 Weak transcription Esophagus oesophagus
11 chr10:97157000-97173200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr10:97157000-97174000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr10:97157000-97183200 Weak transcription Colonic Mucosa Colon
14 chr10:97157000-97190400 Weak transcription Spleen Spleen
15 chr10:97158600-97199600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr10:97158800-97165800 Weak transcription Brain Germinal Matrix brain
17 chr10:97158800-97166400 Weak transcription Brain Substantia Nigra brain
18 chr10:97159000-97166000 Weak transcription Brain Angular Gyrus brain
19 chr10:97159000-97166400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr10:97159000-97166800 Weak transcription Duodenum Mucosa Duodenum
21 chr10:97159000-97167800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr10:97159000-97168000 Weak transcription H9 Cell Line embryonic stem cell
23 chr10:97159000-97168000 Weak transcription HSMM muscle
24 chr10:97159200-97187000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr10:97159800-97167800 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr10:97160000-97166000 Strong transcription Fetal Stomach stomach
27 chr10:97160400-97166600 Weak transcription Fetal Brain Male brain
28 chr10:97160800-97166200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr10:97161800-97167800 Genic enhancers Stomach Smooth Muscle stomach
30 chr10:97162000-97168000 Weak transcription Ovary ovary
31 chr10:97162200-97166400 Weak transcription HMEC breast
32 chr10:97162800-97165800 Strong transcription Fetal Muscle Leg muscle
33 chr10:97162800-97166000 Strong transcription Fetal Muscle Trunk muscle
34 chr10:97162800-97171000 Strong transcription Placenta Placenta
35 chr10:97162800-97171200 Strong transcription Fetal Intestine Large intestine
36 chr10:97163000-97169400 Genic enhancers Left Ventricle heart
37 chr10:97163600-97166000 Genic enhancers Skeletal Muscle Male skeletal muscle
38 chr10:97163600-97166000 Genic enhancers Skeletal Muscle Female skeletal muscle
39 chr10:97163800-97166800 Genic enhancers Colon Smooth Muscle Colon
40 chr10:97164000-97166600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr10:97164000-97167000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr10:97164000-97168200 Genic enhancers Aorta Aorta
43 chr10:97164000-97168600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr10:97164200-97165800 Genic enhancers Brain Anterior Caudate brain
45 chr10:97164200-97165800 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr10:97164200-97168000 Genic enhancers Adipose Nuclei Adipose
47 chr10:97164400-97166000 Strong transcription H1 Cell Line embryonic stem cell
48 chr10:97164400-97168200 Genic enhancers Breast Myoepithelial Primary Cells Breast
49 chr10:97164400-97168200 Enhancers Psoas Muscle Psoas
50 chr10:97164600-97166400 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015