Variant report

Variant	rs57682907
Chromosome Location	chr10:97155873-97155874
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:97132603..97134648-chr10:97154375..97156702,2	K562	blood:
2	chr10:97151073..97155956-chr10:97162503..97165670,4	K562	blood:
3	chr10:97131433..97134103-chr10:97153570..97155875,2	K562	blood:

rs_ID	r²[population]
rs10882581	0.80[EUR][1000 genomes]
rs10882585	0.84[EUR][1000 genomes]
rs10882586	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs11188276	1.00[AFR][1000 genomes]
rs11188286	0.80[EUR][1000 genomes]
rs11188292	0.82[EUR][1000 genomes]
rs11188300	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs11813979	0.80[EUR][1000 genomes]
rs12219964	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12220134	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs12572852	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs1410060	0.90[AMR][1000 genomes]
rs14420	0.80[EUR][1000 genomes]
rs17110707	0.95[ASN][1000 genomes]
rs17849168	0.96[ASN][1000 genomes]
rs1960067	0.82[EUR][1000 genomes]
rs2274632	0.82[EUR][1000 genomes]
rs2296966	0.80[EUR][1000 genomes]
rs35338286	0.80[EUR][1000 genomes]
rs35556067	0.96[ASN][1000 genomes]
rs3740510	1.00[AFR][1000 genomes]
rs3814155	0.80[EUR][1000 genomes]
rs3818540	0.96[ASN][1000 genomes]
rs3818589	0.80[EUR][1000 genomes]
rs67857865	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs7068867	0.96[ASN][1000 genomes]
rs7069281	1.00[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs7085990	0.80[EUR][1000 genomes]
rs7088743	0.80[EUR][1000 genomes]
rs7088852	0.80[EUR][1000 genomes]
rs72822522	0.80[EUR][1000 genomes]

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97130200-97156600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:97137800-97156000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr10:97140600-97158600	Weak transcription	HSMM	muscle
4	chr10:97146800-97168400	Weak transcription	Small Intestine	intestine
5	chr10:97147200-97158800	Genic enhancers	Skeletal Muscle Male	skeletal muscle
6	chr10:97148600-97156600	Weak transcription	Esophagus	oesophagus
7	chr10:97149600-97156600	Weak transcription	Duodenum Mucosa	Duodenum
8	chr10:97149800-97156600	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr10:97150200-97163600	Weak transcription	Stomach Mucosa	stomach
10	chr10:97151000-97166200	Strong transcription	Liver	Liver
11	chr10:97151200-97157400	Weak transcription	Fetal Kidney	kidney
12	chr10:97151800-97168800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr10:97152000-97164200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr10:97152200-97156400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr10:97152200-97156800	Genic enhancers	Adipose Nuclei	Adipose
16	chr10:97152200-97159000	Genic enhancers	Skeletal Muscle Female	skeletal muscle
17	chr10:97152400-97160200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr10:97152600-97157600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
19	chr10:97152800-97156600	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr10:97153000-97156400	Weak transcription	Brain Substantia Nigra	brain
21	chr10:97153200-97162000	Strong transcription	Fetal Muscle Leg	muscle
22	chr10:97153400-97159600	Weak transcription	Fetal Brain Male	brain
23	chr10:97153600-97156600	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr10:97154400-97156000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
25	chr10:97154400-97190800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr10:97154600-97156200	Genic enhancers	Rectal Smooth Muscle	rectum
27	chr10:97154600-97156600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr10:97154600-97156600	Strong transcription	Colon Smooth Muscle	Colon
29	chr10:97154600-97158400	Enhancers	GM12878-XiMat	blood
30	chr10:97154600-97168000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr10:97154800-97156600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr10:97154800-97156600	Weak transcription	K562	blood
33	chr10:97154800-97157600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr10:97154800-97159200	Strong transcription	Fetal Muscle Trunk	muscle
35	chr10:97155200-97156600	Enhancers	Fetal Heart	heart
36	chr10:97155200-97156800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr10:97155200-97157200	Genic enhancers	Right Ventricle	heart
38	chr10:97155200-97159000	Strong transcription	HUES6 Cell Line	embryonic stem cell
39	chr10:97155200-97159000	Strong transcription	Duodenum Smooth Muscle	Duodenum
40	chr10:97155200-97159000	Strong transcription	HSMMtube	muscle
41	chr10:97155200-97159200	Strong transcription	Pancreas	Pancrea
42	chr10:97155200-97160000	Strong transcription	Fetal Brain Female	brain
43	chr10:97155200-97160200	Strong transcription	Fetal Intestine Large	intestine
44	chr10:97155200-97161600	Strong transcription	Brain Hippocampus Middle	brain
45	chr10:97155200-97161800	Genic enhancers	Left Ventricle	heart
46	chr10:97155200-97162000	Strong transcription	HepG2	liver
47	chr10:97155400-97157000	Strong transcription	Colonic Mucosa	Colon
48	chr10:97155400-97158200	Strong transcription	Fetal Stomach	stomach
49	chr10:97155400-97158600	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
50	chr10:97155400-97158600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland

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