Variant report

Variant rs17110707
Chromosome Location chr10:97156908-97156909
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97140600-97158600 Weak transcription HSMM muscle
2 chr10:97146800-97168400 Weak transcription Small Intestine intestine
3 chr10:97147200-97158800 Genic enhancers Skeletal Muscle Male skeletal muscle
4 chr10:97150200-97163600 Weak transcription Stomach Mucosa stomach
5 chr10:97151000-97166200 Strong transcription Liver Liver
6 chr10:97151200-97157400 Weak transcription Fetal Kidney kidney
7 chr10:97151800-97168800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr10:97152000-97164200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr10:97152200-97159000 Genic enhancers Skeletal Muscle Female skeletal muscle
10 chr10:97152400-97160200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr10:97152600-97157600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr10:97153200-97162000 Strong transcription Fetal Muscle Leg muscle
13 chr10:97153400-97159600 Weak transcription Fetal Brain Male brain
14 chr10:97154400-97190800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr10:97154600-97158400 Enhancers GM12878-XiMat blood
16 chr10:97154600-97168000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr10:97154800-97157600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr10:97154800-97159200 Strong transcription Fetal Muscle Trunk muscle
19 chr10:97155200-97157200 Genic enhancers Right Ventricle heart
20 chr10:97155200-97159000 Strong transcription HUES6 Cell Line embryonic stem cell
21 chr10:97155200-97159000 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr10:97155200-97159000 Strong transcription HSMMtube muscle
23 chr10:97155200-97159200 Strong transcription Pancreas Pancrea
24 chr10:97155200-97160000 Strong transcription Fetal Brain Female brain
25 chr10:97155200-97160200 Strong transcription Fetal Intestine Large intestine
26 chr10:97155200-97161600 Strong transcription Brain Hippocampus Middle brain
27 chr10:97155200-97161800 Genic enhancers Left Ventricle heart
28 chr10:97155200-97162000 Strong transcription HepG2 liver
29 chr10:97155400-97157000 Strong transcription Colonic Mucosa Colon
30 chr10:97155400-97158200 Strong transcription Fetal Stomach stomach
31 chr10:97155400-97158600 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr10:97155400-97158600 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr10:97155400-97158600 Genic enhancers Stomach Smooth Muscle stomach
34 chr10:97155400-97159000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr10:97155400-97159200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr10:97155400-97159200 Strong transcription Brain Cingulate Gyrus brain
37 chr10:97155400-97160200 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr10:97155400-97160200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr10:97155400-97161600 Strong transcription Gastric stomach
40 chr10:97155400-97168000 Strong transcription Fetal Intestine Small intestine
41 chr10:97155400-97170800 Enhancers Right Atrium heart
42 chr10:97155600-97157600 Strong transcription Aorta Aorta
43 chr10:97155600-97158400 Strong transcription Fetal Lung lung
44 chr10:97155600-97158800 Strong transcription Brain Germinal Matrix brain
45 chr10:97155600-97159000 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr10:97155600-97159000 Strong transcription iPS-15b Cell Line embryonic stem cell
47 chr10:97155600-97159000 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr10:97155600-97159000 Strong transcription Brain Angular Gyrus brain
49 chr10:97155600-97159000 Strong transcription Ovary ovary
50 chr10:97155600-97159000 Strong transcription Rectal Mucosa Donor 29 rectum

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