Variant report

Variant rs17883304
Chromosome Location chr1:45268032-45268033
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45265200-45268200 Active TSS Pancreatic Islets Pancreatic Islet
2 chr1:45265600-45268200 Active TSS Aorta Aorta
3 chr1:45265600-45268200 Active TSS Psoas Muscle Psoas
4 chr1:45265600-45276600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
5 chr1:45266200-45268400 Flanking Active TSS Primary B cells from cord blood blood
6 chr1:45266200-45270400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
7 chr1:45266400-45268200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
8 chr1:45266400-45268400 Flanking Active TSS Fetal Thymus thymus
9 chr1:45266400-45268600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:45266600-45276400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:45266800-45268800 Weak transcription iPS-18 Cell Line embryonic stem cell
12 chr1:45266800-45272600 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr1:45267000-45268400 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:45267200-45268200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:45267200-45268200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
16 chr1:45267200-45268200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:45267200-45268200 Flanking Active TSS Brain Germinal Matrix brain
18 chr1:45267200-45268400 Transcr. at gene 5' and 3' H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:45267200-45268600 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
20 chr1:45267200-45269800 Transcr. at gene 5' and 3' NHEK skin
21 chr1:45267200-45270200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:45267200-45270400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
23 chr1:45267400-45268200 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
24 chr1:45267400-45268400 Genic enhancers Cortex derived primary cultured neurospheres brain
25 chr1:45267400-45268400 Transcr. at gene 5' and 3' Fetal Adrenal Gland Adrenal Gland
26 chr1:45267400-45268400 Enhancers Placenta Amnion Placenta Amnion
27 chr1:45267400-45269200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:45267400-45272800 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
29 chr1:45267600-45268200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:45267600-45268200 Genic enhancers HUES48 Cell Line embryonic stem cell
31 chr1:45267600-45268200 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
32 chr1:45267600-45268200 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr1:45267600-45268200 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:45267600-45268200 Flanking Active TSS Brain Hippocampus Middle brain
35 chr1:45267600-45268200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
36 chr1:45267600-45268200 Flanking Active TSS Colonic Mucosa Colon
37 chr1:45267600-45268200 Flanking Active TSS Fetal Kidney kidney
38 chr1:45267600-45268200 Transcr. at gene 5' and 3' Fetal Stomach stomach
39 chr1:45267600-45268200 Transcr. at gene 5' and 3' Lung lung
40 chr1:45267600-45268200 Transcr. at gene 5' and 3' Pancreas Pancrea
41 chr1:45267600-45268200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
42 chr1:45267600-45268200 Flanking Active TSS Right Atrium heart
43 chr1:45267600-45268200 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
44 chr1:45267600-45268200 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
45 chr1:45267600-45268200 Transcr. at gene 5' and 3' Thymus Thymus
46 chr1:45267600-45268200 Transcr. at gene 5' and 3' K562 blood
47 chr1:45267600-45268400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:45267600-45268400 Flanking Active TSS Primary T cells from cord blood blood
49 chr1:45267600-45268400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
50 chr1:45267600-45268400 Flanking Active TSS Brain Angular Gyrus brain

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