Variant report

Variant rs16832249
Chromosome Location chr1:45285048-45285049
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45279800-45285600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:45279800-45285800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:45280800-45285200 Weak transcription Esophagus oesophagus
4 chr1:45281800-45285600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:45282800-45285200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:45284000-45285800 Weak transcription Gastric stomach
7 chr1:45284400-45285600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:45284600-45285200 Flanking Active TSS Primary B cells from cord blood blood
9 chr1:45284600-45285400 Flanking Active TSS Primary monocytes fromperipheralblood blood
10 chr1:45284600-45285600 Enhancers HMEC breast
11 chr1:45284600-45286600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
12 chr1:45284600-45287000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:45284800-45285200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:45284800-45285200 Flanking Active TSS Primary B cells from peripheral blood blood
15 chr1:45284800-45285200 Flanking Active TSS Primary T cells from cord blood blood
16 chr1:45284800-45285200 Flanking Active TSS Primary T cells fromperipheralblood blood
17 chr1:45284800-45285200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
18 chr1:45284800-45285200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
19 chr1:45284800-45285200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
20 chr1:45284800-45285200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
21 chr1:45284800-45285200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
22 chr1:45284800-45285200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:45284800-45285200 Flanking Active TSS Muscle Satellite Cultured Cells --
24 chr1:45284800-45285200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:45284800-45285200 Flanking Active TSS Adipose Nuclei Adipose
26 chr1:45284800-45285200 Flanking Active TSS Liver Liver
27 chr1:45284800-45285200 Flanking Active TSS Brain Hippocampus Middle brain
28 chr1:45284800-45285200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
29 chr1:45284800-45285200 Flanking Active TSS Fetal Intestine Large intestine
30 chr1:45284800-45285200 Flanking Active TSS Fetal Intestine Small intestine
31 chr1:45284800-45285200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
32 chr1:45284800-45285200 Flanking Active TSS Stomach Mucosa stomach
33 chr1:45284800-45285200 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr1:45284800-45285200 Flanking Active TSS GM12878-XiMat blood
35 chr1:45284800-45285200 Flanking Active TSS K562 blood
36 chr1:45284800-45285200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
37 chr1:45284800-45285200 Flanking Active TSS NH-A brain
38 chr1:45284800-45285200 Flanking Active TSS NHDF-Ad bronchial
39 chr1:45284800-45285200 Flanking Active TSS Osteobl bone
40 chr1:45284800-45285400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
41 chr1:45284800-45285400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:45284800-45285400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:45284800-45285400 Flanking Active TSS HUVEC blood vessel
44 chr1:45284800-45285400 Flanking Active TSS NHEK skin
45 chr1:45284800-45285600 Active TSS ES-I3 Cell Line embryonic stem cell
46 chr1:45284800-45285600 Active TSS H1 Cell Line embryonic stem cell
47 chr1:45284800-45285600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:45284800-45285600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:45284800-45285600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
50 chr1:45284800-45285600 Bivalent/Poised TSS Brain Germinal Matrix brain

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