The 2.0 version of rSNPBase

Variant report

Variant rs2078329
Chromosome Location chr1:45368493-45368494
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45334600-45371800 Weak transcription Gastric stomach
2 chr1:45347600-45410800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:45350800-45369000 Weak transcription Brain Angular Gyrus brain
4 chr1:45350800-45382400 Weak transcription Pancreas Pancrea
5 chr1:45350800-45411800 Weak transcription Left Ventricle heart
6 chr1:45353000-45374000 Weak transcription Fetal Heart heart
7 chr1:45355800-45369000 Weak transcription Brain Cingulate Gyrus brain
8 chr1:45355800-45411200 Weak transcription Fetal Lung lung
9 chr1:45356000-45369000 Weak transcription Brain Hippocampus Middle brain
10 chr1:45356000-45373000 Weak transcription Brain Anterior Caudate brain
11 chr1:45356000-45407000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:45356000-45423800 Weak transcription Thymus Thymus
13 chr1:45356400-45390600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:45356800-45374600 Weak transcription Spleen Spleen
15 chr1:45357200-45388400 Weak transcription Fetal Intestine Large intestine
16 chr1:45357400-45390600 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr1:45357400-45411800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:45357600-45391600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:45357800-45391000 Weak transcription Primary monocytes fromperipheralblood blood
20 chr1:45358200-45368800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:45358200-45396800 Weak transcription Fetal Intestine Small intestine
22 chr1:45359000-45369000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:45359000-45369000 Weak transcription Fetal Kidney kidney
24 chr1:45359000-45411800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:45359200-45369000 Weak transcription HSMMtube muscle
26 chr1:45359200-45390200 Weak transcription HSMM muscle
27 chr1:45359200-45390600 Weak transcription Dnd41 blood
28 chr1:45359200-45396800 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr1:45359200-45423600 Weak transcription Primary T cells fromperipheralblood blood
30 chr1:45359400-45368600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:45359400-45368600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:45360600-45410000 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr1:45360800-45390400 Weak transcription HMEC breast
34 chr1:45360800-45396800 Weak transcription Primary B cells from cord blood blood
35 chr1:45361000-45369000 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:45361000-45377800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:45361000-45389800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:45362200-45376000 Weak transcription Right Atrium heart
39 chr1:45362200-45390400 Weak transcription Primary hematopoietic stem cells blood
40 chr1:45362200-45424200 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:45362400-45374400 Weak transcription Aorta Aorta
42 chr1:45362400-45376000 Weak transcription NHLF lung
43 chr1:45362400-45390800 Weak transcription Duodenum Mucosa Duodenum
44 chr1:45362400-45397000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:45362800-45371600 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr1:45362800-45372800 Weak transcription Primary B cells from peripheral blood blood
47 chr1:45362800-45390200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:45362800-45390800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr1:45363000-45389800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:45363200-45390600 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015