The 2.0 version of rSNPBase

Variant report

Variant rs263961
Chromosome Location chr1:45353676-45353677
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:45309600-45354200 Weak transcription Fetal Brain Male brain
3 chr1:45313400-45360200 Weak transcription Hela-S3 cervix
4 chr1:45317800-45355600 Weak transcription NHDF-Ad bronchial
5 chr1:45322600-45360000 Weak transcription Small Intestine intestine
6 chr1:45332600-45357200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr1:45333400-45357000 Weak transcription Fetal Kidney kidney
8 chr1:45334600-45371800 Weak transcription Gastric stomach
9 chr1:45337400-45355600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:45340800-45361800 Weak transcription Aorta Aorta
11 chr1:45341200-45354000 Weak transcription Stomach Mucosa stomach
12 chr1:45341200-45355600 Weak transcription NHLF lung
13 chr1:45341400-45354800 Weak transcription Psoas Muscle Psoas
14 chr1:45345600-45366200 Weak transcription Esophagus oesophagus
15 chr1:45345800-45363600 Weak transcription Colonic Mucosa Colon
16 chr1:45346200-45353800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:45346200-45359200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr1:45346400-45363200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:45347600-45353800 Weak transcription HSMMtube muscle
20 chr1:45347600-45353800 Weak transcription Osteobl bone
21 chr1:45347600-45354400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:45347600-45356400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:45347600-45358800 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr1:45347600-45360400 Weak transcription HMEC breast
25 chr1:45347600-45362600 Weak transcription Lung lung
26 chr1:45347600-45410800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr1:45348000-45360000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:45349000-45357000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:45349600-45353800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:45349600-45358400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr1:45349600-45360000 Weak transcription Muscle Satellite Cultured Cells --
32 chr1:45350600-45355600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:45350600-45360600 Weak transcription Rectal Smooth Muscle rectum
34 chr1:45350600-45361200 Weak transcription Stomach Smooth Muscle stomach
35 chr1:45350800-45354000 Weak transcription Adipose Nuclei Adipose
36 chr1:45350800-45355600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:45350800-45355600 Weak transcription Brain Cingulate Gyrus brain
38 chr1:45350800-45355600 Weak transcription Brain Hippocampus Middle brain
39 chr1:45350800-45363200 Weak transcription Right Ventricle heart
40 chr1:45350800-45363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:45350800-45364200 Weak transcription Colon Smooth Muscle Colon
42 chr1:45350800-45369000 Weak transcription Brain Angular Gyrus brain
43 chr1:45350800-45382400 Weak transcription Pancreas Pancrea
44 chr1:45350800-45411800 Weak transcription Left Ventricle heart
45 chr1:45351000-45355600 Weak transcription Brain Anterior Caudate brain
46 chr1:45351000-45355600 Weak transcription Brain Inferior Temporal Lobe brain
47 chr1:45351200-45355400 Weak transcription HUVEC blood vessel
48 chr1:45351400-45357800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
49 chr1:45351400-45358200 ZNF genes & repeats Fetal Intestine Small intestine
50 chr1:45351800-45357200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015