The 2.0 version of rSNPBase

Variant report

Variant rs435311
Chromosome Location chr1:45425305-45425306
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45389200-45450200 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45390400-45426200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:45391200-45438400 Weak transcription Dnd41 blood
4 chr1:45391200-45439800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr1:45391400-45437200 Weak transcription Fetal Thymus thymus
6 chr1:45392400-45433800 Weak transcription Primary hematopoietic stem cells blood
7 chr1:45392800-45443200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:45397800-45435800 Weak transcription Primary B cells from cord blood blood
9 chr1:45407600-45438400 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr1:45412000-45440000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:45412800-45441000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:45413000-45429200 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr1:45413200-45436200 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr1:45413400-45437800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:45413400-45439600 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr1:45413400-45439800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:45413400-45441400 Weak transcription Brain Anterior Caudate brain
18 chr1:45413600-45441400 Weak transcription Colon Smooth Muscle Colon
19 chr1:45413600-45442800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr1:45413800-45433800 Weak transcription NH-A brain
21 chr1:45413800-45437600 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:45413800-45438400 Weak transcription Right Ventricle heart
23 chr1:45413800-45439800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:45413800-45441600 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:45414000-45435600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:45414000-45436200 Weak transcription Ovary ovary
27 chr1:45414000-45438400 Weak transcription Stomach Smooth Muscle stomach
28 chr1:45414000-45439400 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr1:45414000-45439600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr1:45414000-45440000 Weak transcription Brain Angular Gyrus brain
31 chr1:45414000-45440000 Weak transcription Fetal Lung lung
32 chr1:45414000-45441000 Weak transcription Fetal Kidney kidney
33 chr1:45414000-45441600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:45414000-45443200 Weak transcription Pancreas Pancrea
35 chr1:45414000-45450800 Weak transcription Rectal Smooth Muscle rectum
36 chr1:45414000-45451000 Weak transcription Spleen Spleen
37 chr1:45414200-45433800 Weak transcription HSMM muscle
38 chr1:45414200-45433800 Weak transcription HUVEC blood vessel
39 chr1:45414200-45443000 Weak transcription Gastric stomach
40 chr1:45415000-45437200 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr1:45415400-45438600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:45415600-45440400 Weak transcription Fetal Brain Female brain
43 chr1:45416600-45443600 Weak transcription Psoas Muscle Psoas
44 chr1:45417200-45428200 Weak transcription HepG2 liver
45 chr1:45417600-45442000 Weak transcription Placenta Placenta
46 chr1:45421000-45450800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:45421200-45426400 Weak transcription Small Intestine intestine
48 chr1:45421400-45443400 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr1:45422000-45441400 Weak transcription Esophagus oesophagus
50 chr1:45423400-45433800 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015