Variant report

Variant rs7546853
Chromosome Location chr1:45342964-45342965
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45308800-45345400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45309200-45343000 Weak transcription Esophagus oesophagus
3 chr1:45309200-45345200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:45309400-45343000 Weak transcription Colonic Mucosa Colon
6 chr1:45309400-45350400 Weak transcription HUVEC blood vessel
7 chr1:45309600-45343000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:45309600-45352400 Weak transcription Fetal Heart heart
9 chr1:45309600-45354200 Weak transcription Fetal Brain Male brain
10 chr1:45313400-45343600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:45313400-45360200 Weak transcription Hela-S3 cervix
12 chr1:45314600-45349000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr1:45315000-45349000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr1:45315200-45345000 Weak transcription Right Ventricle heart
15 chr1:45315600-45343000 Weak transcription Brain Substantia Nigra brain
16 chr1:45316000-45349000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:45316600-45351800 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr1:45317800-45355600 Weak transcription NHDF-Ad bronchial
19 chr1:45320000-45348800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:45322000-45350400 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:45322600-45360000 Weak transcription Small Intestine intestine
22 chr1:45322800-45343400 Weak transcription Brain Germinal Matrix brain
23 chr1:45326000-45346600 Weak transcription HMEC breast
24 chr1:45326600-45343600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr1:45326800-45349000 Weak transcription GM12878-XiMat blood
26 chr1:45326800-45350400 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr1:45327800-45343400 Weak transcription HSMMtube muscle
28 chr1:45327800-45350000 Weak transcription Colon Smooth Muscle Colon
29 chr1:45331200-45352200 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr1:45331600-45352400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr1:45332000-45345000 Weak transcription A549 lung
32 chr1:45332600-45357200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:45333200-45343000 Weak transcription Spleen Spleen
34 chr1:45333400-45357000 Weak transcription Fetal Kidney kidney
35 chr1:45334600-45344200 Weak transcription Fetal Thymus thymus
36 chr1:45334600-45371800 Weak transcription Gastric stomach
37 chr1:45336000-45343000 Weak transcription Brain Cingulate Gyrus brain
38 chr1:45336000-45345400 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr1:45336000-45347600 Strong transcription Fetal Muscle Trunk muscle
40 chr1:45336200-45345400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr1:45337400-45355600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr1:45337800-45343200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:45337800-45347000 Weak transcription Fetal Brain Female brain
44 chr1:45338200-45343000 Weak transcription Fetal Intestine Large intestine
45 chr1:45338200-45343000 Weak transcription Fetal Intestine Small intestine
46 chr1:45338400-45343000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:45338800-45349000 Weak transcription H1 Cell Line embryonic stem cell
48 chr1:45339000-45345000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:45339200-45343000 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr1:45340600-45343200 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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