The 2.0 version of rSNPBase

Variant report

Variant rs1114390
Chromosome Location chr1:45354453-45354454
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:45313400-45360200 Weak transcription Hela-S3 cervix
3 chr1:45317800-45355600 Weak transcription NHDF-Ad bronchial
4 chr1:45322600-45360000 Weak transcription Small Intestine intestine
5 chr1:45332600-45357200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:45333400-45357000 Weak transcription Fetal Kidney kidney
7 chr1:45334600-45371800 Weak transcription Gastric stomach
8 chr1:45337400-45355600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:45340800-45361800 Weak transcription Aorta Aorta
10 chr1:45341200-45355600 Weak transcription NHLF lung
11 chr1:45341400-45354800 Weak transcription Psoas Muscle Psoas
12 chr1:45345600-45366200 Weak transcription Esophagus oesophagus
13 chr1:45345800-45363600 Weak transcription Colonic Mucosa Colon
14 chr1:45346200-45359200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr1:45346400-45363200 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:45347600-45356400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:45347600-45358800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr1:45347600-45360400 Weak transcription HMEC breast
19 chr1:45347600-45362600 Weak transcription Lung lung
20 chr1:45347600-45410800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:45348000-45360000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:45349000-45357000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:45349600-45358400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:45349600-45360000 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:45350600-45355600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:45350600-45360600 Weak transcription Rectal Smooth Muscle rectum
27 chr1:45350600-45361200 Weak transcription Stomach Smooth Muscle stomach
28 chr1:45350800-45355600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:45350800-45355600 Weak transcription Brain Cingulate Gyrus brain
30 chr1:45350800-45355600 Weak transcription Brain Hippocampus Middle brain
31 chr1:45350800-45363200 Weak transcription Right Ventricle heart
32 chr1:45350800-45363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:45350800-45364200 Weak transcription Colon Smooth Muscle Colon
34 chr1:45350800-45369000 Weak transcription Brain Angular Gyrus brain
35 chr1:45350800-45382400 Weak transcription Pancreas Pancrea
36 chr1:45350800-45411800 Weak transcription Left Ventricle heart
37 chr1:45351000-45355600 Weak transcription Brain Anterior Caudate brain
38 chr1:45351000-45355600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr1:45351200-45355400 Weak transcription HUVEC blood vessel
40 chr1:45351400-45357800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
41 chr1:45351400-45358200 ZNF genes & repeats Fetal Intestine Small intestine
42 chr1:45351800-45357200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
43 chr1:45351800-45357200 ZNF genes & repeats Fetal Muscle Leg muscle
44 chr1:45351800-45358600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:45352000-45356600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr1:45352000-45358200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
47 chr1:45352200-45354600 ZNF genes & repeats Primary B cells from peripheral blood blood
48 chr1:45352200-45355200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:45352200-45355400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:45352200-45356200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015