The 2.0 version of rSNPBase

Variant report

Variant rs60741033
Chromosome Location chr1:45338135-45338136
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45308800-45345400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45309200-45343000 Weak transcription Esophagus oesophagus
3 chr1:45309200-45345200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:45309400-45338200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:45309400-45339600 Weak transcription Primary hematopoietic stem cells blood
7 chr1:45309400-45340000 Weak transcription NHLF lung
8 chr1:45309400-45340400 Weak transcription Rectal Smooth Muscle rectum
9 chr1:45309400-45343000 Weak transcription Colonic Mucosa Colon
10 chr1:45309400-45350400 Weak transcription HUVEC blood vessel
11 chr1:45309600-45343000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr1:45309600-45352400 Weak transcription Fetal Heart heart
13 chr1:45309600-45354200 Weak transcription Fetal Brain Male brain
14 chr1:45313400-45343600 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr1:45313400-45360200 Weak transcription Hela-S3 cervix
16 chr1:45314600-45349000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr1:45315000-45340200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:45315000-45341000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:45315000-45349000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:45315200-45345000 Weak transcription Right Ventricle heart
21 chr1:45315600-45343000 Weak transcription Brain Substantia Nigra brain
22 chr1:45316000-45341000 Weak transcription Thymus Thymus
23 chr1:45316000-45349000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:45316600-45351800 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:45316800-45340400 Weak transcription Fetal Lung lung
26 chr1:45316800-45340600 Weak transcription Lung lung
27 chr1:45317800-45355600 Weak transcription NHDF-Ad bronchial
28 chr1:45320000-45348800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:45322000-45340200 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr1:45322000-45350400 Weak transcription H9 Cell Line embryonic stem cell
31 chr1:45322600-45360000 Weak transcription Small Intestine intestine
32 chr1:45322800-45343400 Weak transcription Brain Germinal Matrix brain
33 chr1:45325000-45341000 Weak transcription Pancreas Pancrea
34 chr1:45326000-45346600 Weak transcription HMEC breast
35 chr1:45326200-45340000 Weak transcription NH-A brain
36 chr1:45326600-45343600 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr1:45326800-45349000 Weak transcription GM12878-XiMat blood
38 chr1:45326800-45350400 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:45327000-45338400 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr1:45327000-45341400 Strong transcription Liver Liver
41 chr1:45327200-45340000 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr1:45327200-45341000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr1:45327400-45338200 Weak transcription Brain Anterior Caudate brain
44 chr1:45327800-45343400 Weak transcription HSMMtube muscle
45 chr1:45327800-45350000 Weak transcription Colon Smooth Muscle Colon
46 chr1:45328800-45340600 Weak transcription Placenta Placenta
47 chr1:45329200-45341000 Weak transcription NHEK skin
48 chr1:45330600-45338400 Strong transcription Fetal Stomach stomach
49 chr1:45331200-45340000 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr1:45331200-45352200 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015