The 2.0 version of rSNPBase

Variant report

Variant rs61149327
Chromosome Location chr1:45313640-45313641
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45308800-45345400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45309000-45315800 Weak transcription Lung lung
3 chr1:45309000-45324600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:45309000-45332600 Weak transcription Spleen Spleen
5 chr1:45309000-45335600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:45309200-45314000 Weak transcription Right Ventricle heart
7 chr1:45309200-45314200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:45309200-45314400 Weak transcription Aorta Aorta
9 chr1:45309200-45314800 Weak transcription Left Ventricle heart
10 chr1:45309200-45316000 Weak transcription Pancreas Pancrea
11 chr1:45309200-45316200 Weak transcription Gastric stomach
12 chr1:45309200-45323200 Weak transcription HSMM muscle
13 chr1:45309200-45336800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr1:45309200-45337800 Weak transcription Psoas Muscle Psoas
15 chr1:45309200-45343000 Weak transcription Esophagus oesophagus
16 chr1:45309200-45345200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:45309400-45313800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:45309400-45313800 Weak transcription Brain Angular Gyrus brain
20 chr1:45309400-45313800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:45309400-45313800 Weak transcription Brain Substantia Nigra brain
22 chr1:45309400-45314000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:45309400-45314000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:45309400-45314000 Weak transcription Brain Cingulate Gyrus brain
25 chr1:45309400-45314200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:45309400-45314200 Weak transcription Fetal Kidney kidney
27 chr1:45309400-45314400 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:45309400-45314600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:45309400-45314600 Weak transcription Fetal Thymus thymus
30 chr1:45309400-45314800 Weak transcription NHEK skin
31 chr1:45309400-45315000 Weak transcription Placenta Placenta
32 chr1:45309400-45315200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:45309400-45315400 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:45309400-45315400 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr1:45309400-45315400 Weak transcription Osteobl bone
36 chr1:45309400-45315600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:45309400-45315600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr1:45309400-45315600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:45309400-45315600 Weak transcription Duodenum Mucosa Duodenum
40 chr1:45309400-45315600 Weak transcription K562 blood
41 chr1:45309400-45315800 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:45309400-45315800 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr1:45309400-45315800 Weak transcription Liver Liver
44 chr1:45309400-45315800 Weak transcription Fetal Intestine Large intestine
45 chr1:45309400-45315800 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:45309400-45315800 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr1:45309400-45316000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:45309400-45316200 Weak transcription Dnd41 blood
49 chr1:45309400-45316400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:45309400-45317200 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015