The 2.0 version of rSNPBase

Variant report

Variant rs17392632
Chromosome Location chr1:45333719-45333720
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45308800-45345400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45309000-45335600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:45309200-45336800 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr1:45309200-45337800 Weak transcription Psoas Muscle Psoas
5 chr1:45309200-45343000 Weak transcription Esophagus oesophagus
6 chr1:45309200-45345200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:45309400-45338200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:45309400-45339600 Weak transcription Primary hematopoietic stem cells blood
10 chr1:45309400-45340000 Weak transcription NHLF lung
11 chr1:45309400-45340400 Weak transcription Rectal Smooth Muscle rectum
12 chr1:45309400-45343000 Weak transcription Colonic Mucosa Colon
13 chr1:45309400-45350400 Weak transcription HUVEC blood vessel
14 chr1:45309600-45343000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:45309600-45352400 Weak transcription Fetal Heart heart
16 chr1:45309600-45354200 Weak transcription Fetal Brain Male brain
17 chr1:45313400-45343600 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:45313400-45360200 Weak transcription Hela-S3 cervix
19 chr1:45314600-45349000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:45315000-45340200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:45315000-45341000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:45315000-45349000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:45315200-45345000 Weak transcription Right Ventricle heart
24 chr1:45315600-45343000 Weak transcription Brain Substantia Nigra brain
25 chr1:45315800-45337600 Weak transcription HepG2 liver
26 chr1:45316000-45336600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:45316000-45337400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:45316000-45341000 Weak transcription Thymus Thymus
29 chr1:45316000-45349000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:45316600-45351800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr1:45316800-45340400 Weak transcription Fetal Lung lung
32 chr1:45316800-45340600 Weak transcription Lung lung
33 chr1:45317200-45334200 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:45317800-45355600 Weak transcription NHDF-Ad bronchial
35 chr1:45320000-45348800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:45322000-45340200 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr1:45322000-45350400 Weak transcription H9 Cell Line embryonic stem cell
38 chr1:45322600-45360000 Weak transcription Small Intestine intestine
39 chr1:45322800-45343400 Weak transcription Brain Germinal Matrix brain
40 chr1:45323000-45337800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:45323400-45334200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:45323600-45334200 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr1:45323600-45334200 Weak transcription HSMM muscle
44 chr1:45323600-45334400 Weak transcription Primary T cells fromperipheralblood blood
45 chr1:45323600-45337200 Weak transcription Brain Angular Gyrus brain
46 chr1:45323800-45336000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:45324400-45334200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:45325000-45337600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:45325000-45337600 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr1:45325000-45341000 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015