The 2.0 version of rSNPBase

Variant report

Variant rs72674064
Chromosome Location chr1:45312267-45312268
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45308800-45345400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45309000-45315800 Weak transcription Lung lung
3 chr1:45309000-45324600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:45309000-45332600 Weak transcription Spleen Spleen
5 chr1:45309000-45335600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:45309200-45313400 Weak transcription HepG2 liver
7 chr1:45309200-45313600 Weak transcription Primary T cells from cord blood blood
8 chr1:45309200-45313600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:45309200-45314000 Weak transcription Right Ventricle heart
10 chr1:45309200-45314200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:45309200-45314400 Weak transcription Aorta Aorta
12 chr1:45309200-45314800 Weak transcription Left Ventricle heart
13 chr1:45309200-45316000 Weak transcription Pancreas Pancrea
14 chr1:45309200-45316200 Weak transcription Gastric stomach
15 chr1:45309200-45323200 Weak transcription HSMM muscle
16 chr1:45309200-45336800 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr1:45309200-45337800 Weak transcription Psoas Muscle Psoas
18 chr1:45309200-45343000 Weak transcription Esophagus oesophagus
19 chr1:45309200-45345200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:45309400-45313400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:45309400-45313400 Weak transcription Brain Germinal Matrix brain
23 chr1:45309400-45313400 Weak transcription Brain Hippocampus Middle brain
24 chr1:45309400-45313600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:45309400-45313600 Weak transcription Brain Anterior Caudate brain
26 chr1:45309400-45313800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:45309400-45313800 Weak transcription Brain Angular Gyrus brain
28 chr1:45309400-45313800 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:45309400-45313800 Weak transcription Brain Substantia Nigra brain
30 chr1:45309400-45314000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:45309400-45314000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:45309400-45314000 Weak transcription Brain Cingulate Gyrus brain
33 chr1:45309400-45314200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:45309400-45314200 Weak transcription Fetal Kidney kidney
35 chr1:45309400-45314400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:45309400-45314600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:45309400-45314600 Weak transcription Fetal Thymus thymus
38 chr1:45309400-45314800 Weak transcription NHEK skin
39 chr1:45309400-45315000 Weak transcription Placenta Placenta
40 chr1:45309400-45315200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:45309400-45315400 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:45309400-45315400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr1:45309400-45315400 Weak transcription Osteobl bone
44 chr1:45309400-45315600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:45309400-45315600 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr1:45309400-45315600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr1:45309400-45315600 Weak transcription Duodenum Mucosa Duodenum
48 chr1:45309400-45315600 Weak transcription K562 blood
49 chr1:45309400-45315800 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr1:45309400-45315800 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015