The 2.0 version of rSNPBase

Variant report

Variant rs72676563
Chromosome Location chr1:45411313-45411314
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45350800-45411800 Weak transcription Left Ventricle heart
2 chr1:45356000-45423800 Weak transcription Thymus Thymus
3 chr1:45357400-45411800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:45359000-45411800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:45359200-45423600 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:45362200-45424200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:45373000-45411600 Weak transcription HepG2 liver
8 chr1:45375200-45411800 Weak transcription Aorta Aorta
9 chr1:45378200-45412000 Weak transcription Brain Hippocampus Middle brain
10 chr1:45378600-45412200 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr1:45384600-45412600 Weak transcription Psoas Muscle Psoas
12 chr1:45386400-45411600 Weak transcription Fetal Kidney kidney
13 chr1:45387800-45413000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:45387800-45413200 Weak transcription Spleen Spleen
15 chr1:45388400-45412800 Weak transcription Brain Germinal Matrix brain
16 chr1:45389000-45412600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:45389200-45412800 Weak transcription Brain Anterior Caudate brain
18 chr1:45389200-45450200 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:45389800-45412400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:45390400-45426200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr1:45390600-45411800 Weak transcription Brain Cingulate Gyrus brain
22 chr1:45391000-45411800 Weak transcription HSMMtube muscle
23 chr1:45391200-45411600 Weak transcription Colon Smooth Muscle Colon
24 chr1:45391200-45412800 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:45391200-45438400 Weak transcription Dnd41 blood
26 chr1:45391200-45439800 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:45391400-45437200 Weak transcription Fetal Thymus thymus
28 chr1:45392400-45411800 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr1:45392400-45433800 Weak transcription Primary hematopoietic stem cells blood
30 chr1:45392600-45411800 Weak transcription HSMM muscle
31 chr1:45392600-45412200 Weak transcription Liver Liver
32 chr1:45392600-45412600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:45392600-45423600 Weak transcription Fetal Intestine Large intestine
34 chr1:45392800-45443200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:45393200-45411600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:45393200-45411800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:45396000-45411600 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:45396000-45411800 Weak transcription Gastric stomach
39 chr1:45396200-45411800 Weak transcription Osteobl bone
40 chr1:45396200-45412600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:45397200-45412000 Weak transcription Adipose Nuclei Adipose
42 chr1:45397400-45411800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:45397400-45412400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:45397400-45412600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:45397600-45412200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:45397600-45424000 Weak transcription Primary B cells from peripheral blood blood
47 chr1:45397800-45435800 Weak transcription Primary B cells from cord blood blood
48 chr1:45400800-45421400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:45402800-45424200 Weak transcription Lung lung
50 chr1:45404000-45411800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015