Variant report

Variant rs41269085
Chromosome Location chr1:45285648-45285649
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45279800-45285800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:45284000-45285800 Weak transcription Gastric stomach
3 chr1:45284600-45286600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
4 chr1:45284600-45287000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr1:45284800-45285800 Active TSS Colonic Mucosa Colon
6 chr1:45284800-45285800 Active TSS Rectal Mucosa Donor 29 rectum
7 chr1:45284800-45285800 Flanking Active TSS Hela-S3 cervix
8 chr1:45284800-45286000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr1:45284800-45286000 Active TSS iPS-18 Cell Line embryonic stem cell
10 chr1:45284800-45286000 Active TSS Breast Myoepithelial Primary Cells Breast
11 chr1:45284800-45286000 Active TSS Primary T killer naive cells fromperipheralblood blood
12 chr1:45284800-45286000 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:45284800-45286000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
14 chr1:45284800-45286000 Active TSS Pancreas Pancrea
15 chr1:45284800-45286200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:45284800-45286200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:45284800-45286200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:45284800-45286200 Active TSS Brain Anterior Caudate brain
19 chr1:45284800-45286200 Active TSS Brain Cingulate Gyrus brain
20 chr1:45284800-45286200 Active TSS Duodenum Mucosa Duodenum
21 chr1:45284800-45286200 Active TSS Lung lung
22 chr1:45284800-45286200 Active TSS Rectal Smooth Muscle rectum
23 chr1:45284800-45286200 Active TSS Sigmoid Colon Sigmoid Colon
24 chr1:45284800-45286200 Active TSS Skeletal Muscle Male skeletal muscle
25 chr1:45284800-45286200 Active TSS A549 lung
26 chr1:45284800-45286400 Active TSS HUES64 Cell Line embryonic stem cell
27 chr1:45284800-45286400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
28 chr1:45284800-45286400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
29 chr1:45284800-45286400 Active TSS Aorta Aorta
30 chr1:45284800-45286400 Active TSS Brain Substantia Nigra brain
31 chr1:45284800-45286400 Active TSS Colon Smooth Muscle Colon
32 chr1:45284800-45286400 Active TSS Fetal Kidney kidney
33 chr1:45284800-45286400 Active TSS Pancreatic Islets Pancreatic Islet
34 chr1:45284800-45286400 Flanking Active TSS Fetal Muscle Leg muscle
35 chr1:45284800-45286400 Flanking Active TSS Placenta Placenta
36 chr1:45284800-45286400 Active TSS Psoas Muscle Psoas
37 chr1:45284800-45286600 Active TSS iPS-20b Cell Line embryonic stem cell
38 chr1:45284800-45286600 Flanking Active TSS Primary hematopoietic stem cells blood
39 chr1:45284800-45286600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
40 chr1:45284800-45286600 Active TSS Brain Angular Gyrus brain
41 chr1:45284800-45286600 Flanking Active TSS Fetal Thymus thymus
42 chr1:45284800-45286800 Flanking Active TSS Dnd41 blood
43 chr1:45285000-45285800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
44 chr1:45285000-45285800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:45285000-45285800 Active TSS Primary T helper 17 cells PMA-I stimulated --
46 chr1:45285000-45285800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:45285000-45285800 Active TSS Fetal Brain Male brain
48 chr1:45285000-45285800 Active TSS Fetal Stomach stomach
49 chr1:45285000-45286000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
50 chr1:45285000-45286000 Active TSS Primary T killer memory cells from peripheral blood blood

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