The 2.0 version of rSNPBase

Variant report

Variant rs60787198
Chromosome Location chr1:45339073-45339074
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45308800-45345400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:45309200-45343000 Weak transcription Esophagus oesophagus
3 chr1:45309200-45345200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:45309400-45339600 Weak transcription Primary hematopoietic stem cells blood
6 chr1:45309400-45340000 Weak transcription NHLF lung
7 chr1:45309400-45340400 Weak transcription Rectal Smooth Muscle rectum
8 chr1:45309400-45343000 Weak transcription Colonic Mucosa Colon
9 chr1:45309400-45350400 Weak transcription HUVEC blood vessel
10 chr1:45309600-45343000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:45309600-45352400 Weak transcription Fetal Heart heart
12 chr1:45309600-45354200 Weak transcription Fetal Brain Male brain
13 chr1:45313400-45343600 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:45313400-45360200 Weak transcription Hela-S3 cervix
15 chr1:45314600-45349000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:45315000-45340200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:45315000-45341000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:45315000-45349000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr1:45315200-45345000 Weak transcription Right Ventricle heart
20 chr1:45315600-45343000 Weak transcription Brain Substantia Nigra brain
21 chr1:45316000-45341000 Weak transcription Thymus Thymus
22 chr1:45316000-45349000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:45316600-45351800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:45316800-45340400 Weak transcription Fetal Lung lung
25 chr1:45316800-45340600 Weak transcription Lung lung
26 chr1:45317800-45355600 Weak transcription NHDF-Ad bronchial
27 chr1:45320000-45348800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:45322000-45340200 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr1:45322000-45350400 Weak transcription H9 Cell Line embryonic stem cell
30 chr1:45322600-45360000 Weak transcription Small Intestine intestine
31 chr1:45322800-45343400 Weak transcription Brain Germinal Matrix brain
32 chr1:45325000-45341000 Weak transcription Pancreas Pancrea
33 chr1:45326000-45346600 Weak transcription HMEC breast
34 chr1:45326200-45340000 Weak transcription NH-A brain
35 chr1:45326600-45343600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr1:45326800-45349000 Weak transcription GM12878-XiMat blood
37 chr1:45326800-45350400 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr1:45327000-45341400 Strong transcription Liver Liver
39 chr1:45327200-45340000 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr1:45327200-45341000 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr1:45327800-45343400 Weak transcription HSMMtube muscle
42 chr1:45327800-45350000 Weak transcription Colon Smooth Muscle Colon
43 chr1:45328800-45340600 Weak transcription Placenta Placenta
44 chr1:45329200-45341000 Weak transcription NHEK skin
45 chr1:45331200-45340000 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr1:45331200-45352200 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr1:45331600-45352400 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr1:45332000-45341400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:45332000-45341400 Strong transcription Fetal Muscle Leg muscle
50 chr1:45332000-45345000 Weak transcription A549 lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015