The 2.0 version of rSNPBase

Variant report

Variant rs59559455
Chromosome Location chr1:45376524-45376525
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45347600-45410800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:45350800-45382400 Weak transcription Pancreas Pancrea
3 chr1:45350800-45411800 Weak transcription Left Ventricle heart
4 chr1:45355800-45411200 Weak transcription Fetal Lung lung
5 chr1:45356000-45407000 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:45356000-45423800 Weak transcription Thymus Thymus
7 chr1:45356400-45390600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:45357200-45388400 Weak transcription Fetal Intestine Large intestine
9 chr1:45357400-45390600 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr1:45357400-45411800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:45357600-45391600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:45357800-45391000 Weak transcription Primary monocytes fromperipheralblood blood
13 chr1:45358200-45396800 Weak transcription Fetal Intestine Small intestine
14 chr1:45359000-45411800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:45359200-45390200 Weak transcription HSMM muscle
16 chr1:45359200-45390600 Weak transcription Dnd41 blood
17 chr1:45359200-45396800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:45359200-45423600 Weak transcription Primary T cells fromperipheralblood blood
19 chr1:45360600-45410000 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:45360800-45390400 Weak transcription HMEC breast
21 chr1:45360800-45396800 Weak transcription Primary B cells from cord blood blood
22 chr1:45361000-45377800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:45361000-45389800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:45362200-45390400 Weak transcription Primary hematopoietic stem cells blood
25 chr1:45362200-45424200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr1:45362400-45390800 Weak transcription Duodenum Mucosa Duodenum
27 chr1:45362400-45397000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:45362800-45390200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:45362800-45390800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:45363000-45389800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr1:45363200-45390600 Weak transcription Primary T cells from cord blood blood
32 chr1:45363200-45390800 Weak transcription Liver Liver
33 chr1:45364000-45390000 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:45365400-45388600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:45369200-45381000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr1:45369400-45389800 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:45369400-45390400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:45369400-45390800 Weak transcription HSMMtube muscle
39 chr1:45369400-45396800 Weak transcription Stomach Smooth Muscle stomach
40 chr1:45369600-45379200 Weak transcription Fetal Stomach stomach
41 chr1:45369600-45390000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:45369600-45390400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:45372000-45379000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:45373000-45411600 Weak transcription HepG2 liver
45 chr1:45373600-45377400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:45373600-45377400 Enhancers NHDF-Ad bronchial
47 chr1:45374400-45396600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:45374600-45377000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:45374600-45392000 Weak transcription Adipose Nuclei Adipose
50 chr1:45375200-45411800 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015