The 2.0 version of rSNPBase

Variant report

Variant rs1818585
Chromosome Location chr2:189986523-189986524
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189962400-189995200 Weak transcription Aorta Aorta
2 chr2:189968600-190012000 Weak transcription Fetal Muscle Trunk muscle
3 chr2:189974800-190007600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:189975200-189988600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:189975400-189988600 Weak transcription HUVEC blood vessel
6 chr2:189976000-189986800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr2:189981000-189993400 Weak transcription Ovary ovary
8 chr2:189981200-189992800 Weak transcription NH-A brain
9 chr2:189981200-189998000 Weak transcription Fetal Muscle Leg muscle
10 chr2:189981400-189989800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr2:189981400-189991800 Weak transcription HSMMtube muscle
12 chr2:189981400-189992800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr2:189981400-190014800 Weak transcription Fetal Stomach stomach
14 chr2:189981800-189987400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:189982400-190005800 Weak transcription Fetal Kidney kidney
16 chr2:189982600-189988600 Weak transcription Muscle Satellite Cultured Cells --
17 chr2:189982600-189992600 Weak transcription NHLF lung
18 chr2:189983400-189992000 Weak transcription Adipose Nuclei Adipose
19 chr2:189983600-189987200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr2:189983800-189987400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr2:189984000-190016800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr2:189984200-189991600 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr2:189984200-189992600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr2:189985000-189987400 Strong transcription HSMM muscle
25 chr2:189985400-190000200 Weak transcription Fetal Lung lung
26 chr2:189985600-189988600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr2:189985600-189991400 Weak transcription Colon Smooth Muscle Colon
28 chr2:189985600-189992600 Weak transcription Rectal Smooth Muscle rectum
29 chr2:189985800-189986800 Weak transcription Osteobl bone
30 chr2:189986000-190008800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr2:189986200-189986800 Weak transcription A549 lung
32 chr2:189986400-189986600 Enhancers NHDF-Ad bronchial
33 chr2:189986400-189990000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr2:189986400-189991400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr2:189986400-189992000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015