The 2.0 version of rSNPBase

Variant report

Variant rs58082189
Chromosome Location chr2:189981079-189981080
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189962400-189995200 Weak transcription Aorta Aorta
2 chr2:189968600-190012000 Weak transcription Fetal Muscle Trunk muscle
3 chr2:189974800-190007600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr2:189975200-189988600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr2:189975400-189988600 Weak transcription HUVEC blood vessel
6 chr2:189976000-189986800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr2:189979200-189984000 Enhancers Osteobl bone
8 chr2:189979200-189984200 Enhancers A549 lung
9 chr2:189979400-189983200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr2:189980200-189981400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr2:189980200-189981600 Enhancers Adipose Nuclei Adipose
12 chr2:189980200-189982600 Enhancers Fetal Lung lung
13 chr2:189980400-189981200 Enhancers HUES6 Cell Line embryonic stem cell
14 chr2:189980400-189981200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr2:189980400-189981200 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr2:189980400-189981200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:189980400-189981200 Enhancers Duodenum Smooth Muscle Duodenum
18 chr2:189980400-189981200 Enhancers NH-A brain
19 chr2:189980400-189981200 Genic enhancers NHLF lung
20 chr2:189980400-189981400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr2:189980400-189982600 Enhancers Rectal Smooth Muscle rectum
22 chr2:189980600-189981200 Enhancers H9 Cell Line embryonic stem cell
23 chr2:189980600-189981200 Enhancers HUES48 Cell Line embryonic stem cell
24 chr2:189980600-189981200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:189980600-189981200 Enhancers Fetal Muscle Leg muscle
26 chr2:189980600-189981400 Enhancers iPS-20b Cell Line embryonic stem cell
27 chr2:189980600-189981400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr2:189980600-189981400 Flanking Active TSS NHDF-Ad bronchial
29 chr2:189980600-189982000 Enhancers Stomach Smooth Muscle stomach
30 chr2:189980800-189981200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr2:189980800-189981200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
32 chr2:189980800-189981200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr2:189980800-189981200 Enhancers Cortex derived primary cultured neurospheres brain
34 chr2:189980800-189981200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr2:189980800-189981200 Enhancers Brain Anterior Caudate brain
36 chr2:189980800-189981400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:189980800-189981800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr2:189981000-189981200 Flanking Active TSS Muscle Satellite Cultured Cells --
39 chr2:189981000-189981400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr2:189981000-189981400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr2:189981000-189981400 Enhancers Colon Smooth Muscle Colon
42 chr2:189981000-189981400 Enhancers Fetal Stomach stomach
43 chr2:189981000-189981400 Enhancers HSMMtube muscle
44 chr2:189981000-189982600 Enhancers HSMM muscle
45 chr2:189981000-189993400 Weak transcription Ovary ovary

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Last update: Aug 31, 2015