Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:69935979..69939701-chr6:69947951..69949800,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12198653	1.00[CHB][hapmap]
rs12209170	1.00[CHB][hapmap];0.82[YRI][hapmap]
rs1600874	0.82[AFR][1000 genomes]
rs1619465	0.89[YRI][hapmap]
rs1858396	1.00[CHB][hapmap]
rs3799047	0.85[YRI][hapmap]
rs3799052	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs3799070	1.00[CHB][hapmap]
rs4706883	1.00[ASN][1000 genomes]
rs6915681	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6916250	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7746793	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs779486	0.85[YRI][hapmap]
rs9294819	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs9294824	0.94[YRI][hapmap]
rs9446098	0.83[AFR][1000 genomes]
rs9446102	0.89[YRI][hapmap]
rs9454704	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs9454705	1.00[YRI][hapmap];0.83[AFR][1000 genomes]
rs9454708	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886137	chr6:69684850-70095690	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv432919	chr6:69873179-70221322	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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