Variant report

Variant	rs1864886
Chromosome Location	chr7:38729642-38729643
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11772698	0.95[ASN][1000 genomes]
rs11980087	0.81[GIH][hapmap]
rs12333500	0.96[ASN][1000 genomes]
rs12701652	1.00[CHB][hapmap];0.91[CHD][hapmap];0.90[JPT][hapmap];0.97[ASN][1000 genomes]
rs1468348	0.81[JPT][hapmap]
rs17700172	0.81[JPT][hapmap]
rs2240352	0.81[JPT][hapmap]
rs2286106	0.80[JPT][hapmap]
rs3801139	0.81[JPT][hapmap]
rs3801140	0.81[JPT][hapmap]
rs6964269	0.81[ASN][1000 genomes]
rs7783695	1.00[CHB][hapmap];0.95[CHD][hapmap];0.90[GIH][hapmap];0.95[JPT][hapmap];0.82[MEX][hapmap];0.81[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs9692361	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv887965	chr7:38706384-38793243	Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38722200-38733800	Weak transcription	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
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