Variant report

Variant rs187549556
Chromosome Location chr5:37481171-37481172
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37463800-37489600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr5:37466000-37494400 Weak transcription Osteobl bone
3 chr5:37469600-37481200 Weak transcription Gastric stomach
4 chr5:37471600-37492400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr5:37472200-37481600 Weak transcription Colon Smooth Muscle Colon
6 chr5:37472800-37483800 Weak transcription Fetal Heart heart
7 chr5:37476600-37481200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr5:37476600-37513200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr5:37477000-37482600 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr5:37477000-37504400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr5:37477400-37483000 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr5:37477600-37481400 Strong transcription Primary T cells from cord blood blood
13 chr5:37477800-37481200 Strong transcription Primary B cells from peripheral blood blood
14 chr5:37478000-37483200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr5:37478200-37482800 Strong transcription Primary T cells fromperipheralblood blood
16 chr5:37478400-37481800 ZNF genes & repeats Primary B cells from cord blood blood
17 chr5:37478400-37502800 Weak transcription Psoas Muscle Psoas
18 chr5:37478600-37482400 Weak transcription Spleen Spleen
19 chr5:37478600-37492800 Weak transcription Stomach Mucosa stomach
20 chr5:37478600-37494600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr5:37478600-37502600 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr5:37479200-37482800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr5:37479400-37482800 Strong transcription Fetal Muscle Trunk muscle
24 chr5:37479600-37481200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:37479600-37481200 Strong transcription Fetal Stomach stomach
26 chr5:37479600-37481400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:37479600-37481600 Strong transcription Sigmoid Colon Sigmoid Colon
28 chr5:37479600-37482000 ZNF genes & repeats Fetal Intestine Small intestine
29 chr5:37479600-37483200 Strong transcription Liver Liver
30 chr5:37479600-37486000 Weak transcription HUVEC blood vessel
31 chr5:37479800-37481200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr5:37479800-37481200 Strong transcription Fetal Thymus thymus
33 chr5:37479800-37481400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr5:37479800-37481400 Strong transcription Fetal Lung lung
35 chr5:37479800-37481800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
36 chr5:37479800-37481800 Strong transcription Brain Substantia Nigra brain
37 chr5:37479800-37482200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr5:37479800-37482200 Strong transcription Primary T helper naive cells fromperipheralblood blood
39 chr5:37479800-37482400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
40 chr5:37479800-37482600 Strong transcription Dnd41 blood
41 chr5:37479800-37482800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
42 chr5:37479800-37482800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
43 chr5:37479800-37482800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr5:37479800-37482800 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr5:37479800-37482800 Strong transcription Brain Anterior Caudate brain
46 chr5:37479800-37482800 Strong transcription Duodenum Mucosa Duodenum
47 chr5:37479800-37483000 Strong transcription Primary T helper cells PMA-I stimulated --
48 chr5:37479800-37483000 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr5:37479800-37483600 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr5:37480000-37481200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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