The 2.0 version of rSNPBase

Variant report

Variant rs1927138
Chromosome Location chr9:72791879-72791880
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72759600-72800000 Weak transcription Right Ventricle heart
2 chr9:72759800-72792200 Weak transcription HMEC breast
3 chr9:72775200-72800000 Weak transcription Esophagus oesophagus
4 chr9:72777000-72792400 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr9:72777800-72800000 Weak transcription Fetal Stomach stomach
6 chr9:72779200-72792400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr9:72780400-72796000 Weak transcription Fetal Muscle Leg muscle
8 chr9:72780400-72800000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr9:72780600-72801400 Weak transcription Muscle Satellite Cultured Cells --
10 chr9:72780600-72803600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr9:72783000-72792000 Strong transcription HSMMtube muscle
12 chr9:72783600-72792400 Weak transcription Pancreas Pancrea
13 chr9:72783600-72793600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr9:72783600-72794000 Strong transcription Stomach Smooth Muscle stomach
15 chr9:72783800-72801600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr9:72784400-72793000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr9:72784600-72802000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr9:72785600-72794200 Strong transcription Breast Myoepithelial Primary Cells Breast
19 chr9:72786000-72792200 Weak transcription NH-A brain
20 chr9:72786000-72792400 Weak transcription Ovary ovary
21 chr9:72786200-72792400 Weak transcription Rectal Smooth Muscle rectum
22 chr9:72786400-72795400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr9:72786400-72800400 Weak transcription Aorta Aorta
24 chr9:72786600-72792200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr9:72788200-72794200 Weak transcription Lung lung
26 chr9:72788200-72800200 Weak transcription Left Ventricle heart
27 chr9:72789400-72793200 Weak transcription Gastric stomach
28 chr9:72789800-72792400 Weak transcription Colon Smooth Muscle Colon
29 chr9:72790000-72792400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr9:72790400-72792600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr9:72790400-72793200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr9:72791200-72794000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr9:72791400-72792400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr9:72791400-72793000 Weak transcription Adipose Nuclei Adipose
35 chr9:72791600-72792000 Weak transcription HSMM muscle
36 chr9:72791600-72793000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr9:72791800-72792000 Enhancers Fetal Lung lung
38 chr9:72791800-72793200 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015