The 2.0 version of rSNPBase

Variant report

Variant rs11142375
Chromosome Location chr9:72952034-72952035
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72876400-72955200 Weak transcription Stomach Mucosa stomach
2 chr9:72913800-72957800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr9:72926400-72965000 Weak transcription Fetal Brain Male brain
4 chr9:72926400-72967000 Weak transcription Fetal Heart heart
5 chr9:72936000-72970800 Weak transcription Psoas Muscle Psoas
6 chr9:72939600-72974000 Weak transcription Colon Smooth Muscle Colon
7 chr9:72940400-72954400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr9:72941200-72965000 Weak transcription Hela-S3 cervix
9 chr9:72941400-72965200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr9:72942200-72953800 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr9:72942800-72961400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr9:72943000-72966400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr9:72943000-72966600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr9:72943200-72968600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr9:72943400-72963400 Weak transcription HepG2 liver
16 chr9:72943400-72967200 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr9:72943600-72953800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr9:72943600-72955800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr9:72943600-72970800 Weak transcription Gastric stomach
20 chr9:72944000-72952200 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr9:72944000-72952400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr9:72944000-72957600 Weak transcription Brain Anterior Caudate brain
23 chr9:72944000-72962000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr9:72944000-72963200 Weak transcription Pancreas Pancrea
25 chr9:72944000-72963400 Weak transcription Small Intestine intestine
26 chr9:72944000-72963600 Weak transcription Fetal Brain Female brain
27 chr9:72944000-72965200 Weak transcription Brain Cingulate Gyrus brain
28 chr9:72944000-72965200 Weak transcription Colonic Mucosa Colon
29 chr9:72944000-72970800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr9:72944000-72974600 Weak transcription Aorta Aorta
31 chr9:72944000-72978800 Weak transcription Brain Inferior Temporal Lobe brain
32 chr9:72944000-73002600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr9:72944200-72952600 Weak transcription Fetal Intestine Small intestine
34 chr9:72944200-72953800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr9:72944200-72961400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr9:72944200-72961600 Weak transcription Brain Germinal Matrix brain
37 chr9:72944200-72961800 Weak transcription Brain Angular Gyrus brain
38 chr9:72944200-72963200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr9:72944200-72963400 Weak transcription Esophagus oesophagus
40 chr9:72944200-72964600 Weak transcription H1 Cell Line embryonic stem cell
41 chr9:72944200-72968600 Weak transcription H9 Cell Line embryonic stem cell
42 chr9:72944200-72974000 Weak transcription Spleen Spleen
43 chr9:72944200-72974800 Weak transcription Lung lung
44 chr9:72944400-72959600 Weak transcription NHLF lung
45 chr9:72944400-72963200 Weak transcription Rectal Smooth Muscle rectum
46 chr9:72944400-72963800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr9:72944400-72964000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr9:72944400-72965200 Weak transcription Brain Hippocampus Middle brain
49 chr9:72944400-72965200 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr9:72944400-72966000 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015