The 2.0 version of rSNPBase

Variant report

Variant rs2148867
Chromosome Location chr9:72779473-72779474
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72726800-72785200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr9:72741600-72789400 Weak transcription Spleen Spleen
3 chr9:72752000-72779600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr9:72759600-72800000 Weak transcription Right Ventricle heart
5 chr9:72759800-72792200 Weak transcription HMEC breast
6 chr9:72760000-72785200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr9:72766200-72785200 Weak transcription Left Ventricle heart
8 chr9:72767400-72780200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr9:72768600-72780200 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr9:72769400-72779800 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr9:72770000-72783600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr9:72771600-72780200 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr9:72773200-72783200 Weak transcription Pancreas Pancrea
14 chr9:72774800-72780000 Weak transcription NH-A brain
15 chr9:72775200-72783600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr9:72775200-72800000 Weak transcription Esophagus oesophagus
17 chr9:72775800-72780200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr9:72775800-72785200 Weak transcription Adipose Nuclei Adipose
19 chr9:72776400-72780000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr9:72776800-72791800 Weak transcription Fetal Lung lung
21 chr9:72777000-72792400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr9:72777200-72780000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr9:72777200-72780400 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr9:72777200-72784800 Weak transcription Rectal Smooth Muscle rectum
25 chr9:72777400-72779600 Weak transcription Stomach Smooth Muscle stomach
26 chr9:72777400-72789400 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr9:72777600-72783600 Weak transcription Colon Smooth Muscle Colon
28 chr9:72777800-72780000 Weak transcription Fetal Muscle Leg muscle
29 chr9:72777800-72785200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr9:72777800-72785400 Weak transcription Ovary ovary
31 chr9:72777800-72800000 Weak transcription Fetal Stomach stomach
32 chr9:72778400-72785400 Weak transcription Aorta Aorta
33 chr9:72778800-72780200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr9:72779000-72780600 Enhancers Muscle Satellite Cultured Cells --
35 chr9:72779000-72780800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr9:72779200-72779800 Strong transcription HSMMtube muscle
37 chr9:72779200-72780600 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr9:72779200-72789600 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr9:72779200-72792400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr9:72779400-72779600 Enhancers HSMM muscle

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Last update: Aug 31, 2015