The 2.0 version of rSNPBase

Variant report

Variant rs1927101
Chromosome Location chr9:72843218-72843219
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72821200-72844800 Weak transcription HMEC breast
2 chr9:72828000-72844000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr9:72828000-72858800 Weak transcription Gastric stomach
4 chr9:72828200-72844000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr9:72829600-72843400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr9:72830800-72845200 Weak transcription Duodenum Mucosa Duodenum
7 chr9:72832400-72848800 Weak transcription Lung lung
8 chr9:72833600-72856800 Weak transcription Aorta Aorta
9 chr9:72834400-72843800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr9:72834600-72844000 Weak transcription Left Ventricle heart
11 chr9:72837200-72847200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr9:72837800-72844000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr9:72838200-72843600 Weak transcription Osteobl bone
14 chr9:72839800-72844800 Weak transcription HSMMtube muscle
15 chr9:72840400-72844000 Weak transcription HSMM muscle
16 chr9:72841200-72843800 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr9:72841400-72843400 Weak transcription Colon Smooth Muscle Colon
18 chr9:72841400-72844200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr9:72842600-72843600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr9:72842600-72844000 Weak transcription Right Ventricle heart
21 chr9:72842600-72844600 Enhancers Rectal Smooth Muscle rectum
22 chr9:72843000-72843800 Enhancers Pancreatic Islets Pancreatic Islet
23 chr9:72843000-72844000 Enhancers Fetal Brain Female brain
24 chr9:72843000-72844600 Enhancers Fetal Brain Male brain
25 chr9:72843000-72845000 Enhancers Cortex derived primary cultured neurospheres brain
26 chr9:72843000-72846200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr9:72843200-72843600 Enhancers Psoas Muscle Psoas
28 chr9:72843200-72843600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
29 chr9:72843200-72844000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr9:72843200-72844200 Genic enhancers Breast Myoepithelial Primary Cells Breast
31 chr9:72843200-72844200 Enhancers Brain Inferior Temporal Lobe brain
32 chr9:72843200-72844600 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr9:72843200-72844600 Enhancers Skeletal Muscle Male skeletal muscle
34 chr9:72843200-72844800 Enhancers Placenta Amnion Placenta Amnion
35 chr9:72843200-72845000 Enhancers Muscle Satellite Cultured Cells --
36 chr9:72843200-72845000 Enhancers Fetal Lung lung
37 chr9:72843200-72845000 Enhancers Ovary ovary
38 chr9:72843200-72845200 Enhancers Duodenum Smooth Muscle Duodenum
39 chr9:72843200-72845800 Enhancers Fetal Muscle Leg muscle
40 chr9:72843200-72845800 Enhancers Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015