The 2.0 version of rSNPBase

Variant report

Variant rs5019539
Chromosome Location chr9:72834532-72834533
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72793000-72842600 Weak transcription Rectal Smooth Muscle rectum
2 chr9:72809600-72837800 Weak transcription NH-A brain
3 chr9:72820800-72835400 Weak transcription Placenta Amnion Placenta Amnion
4 chr9:72821200-72844800 Weak transcription HMEC breast
5 chr9:72827600-72843200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr9:72827800-72841600 Weak transcription Placenta Placenta
7 chr9:72828000-72836600 Weak transcription Right Ventricle heart
8 chr9:72828000-72837000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr9:72828000-72844000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr9:72828000-72858800 Weak transcription Gastric stomach
11 chr9:72828200-72835400 Weak transcription Adipose Nuclei Adipose
12 chr9:72828200-72835400 Weak transcription Small Intestine intestine
13 chr9:72828200-72843200 Weak transcription Fetal Lung lung
14 chr9:72828200-72844000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr9:72828600-72837200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr9:72828600-72843000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr9:72829000-72841800 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr9:72829400-72835200 Weak transcription Psoas Muscle Psoas
19 chr9:72829600-72839200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr9:72829600-72843400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr9:72830200-72836200 Strong transcription Stomach Smooth Muscle stomach
22 chr9:72830200-72836600 Weak transcription Pancreas Pancrea
23 chr9:72830200-72837200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr9:72830200-72837200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr9:72830800-72845200 Weak transcription Duodenum Mucosa Duodenum
26 chr9:72831400-72836800 Weak transcription Brain Angular Gyrus brain
27 chr9:72831600-72835200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr9:72831600-72841000 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr9:72831800-72835400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr9:72832400-72841400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr9:72832400-72848800 Weak transcription Lung lung
32 chr9:72833200-72834600 Strong transcription Left Ventricle heart
33 chr9:72833200-72836000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr9:72833200-72836000 Strong transcription Colon Smooth Muscle Colon
35 chr9:72833200-72836200 Strong transcription Duodenum Smooth Muscle Duodenum
36 chr9:72833200-72839800 Strong transcription HSMMtube muscle
37 chr9:72833400-72835800 Strong transcription HSMM muscle
38 chr9:72833600-72835200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr9:72833600-72835600 Strong transcription Ovary ovary
40 chr9:72833600-72839400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr9:72833600-72856800 Weak transcription Aorta Aorta
42 chr9:72834200-72835000 Strong transcription Breast Myoepithelial Primary Cells Breast
43 chr9:72834200-72835200 Weak transcription Osteobl bone
44 chr9:72834200-72835800 Strong transcription Fetal Muscle Leg muscle
45 chr9:72834200-72837400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr9:72834200-72837400 Weak transcription Muscle Satellite Cultured Cells --
47 chr9:72834400-72836800 Weak transcription NHDF-Ad bronchial
48 chr9:72834400-72837000 Weak transcription NHLF lung
49 chr9:72834400-72837400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr9:72834400-72843800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015