The 2.0 version of rSNPBase

Variant report

Variant rs17526808
Chromosome Location chr9:72809611-72809612
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72793000-72842600 Weak transcription Rectal Smooth Muscle rectum
2 chr9:72800800-72811600 Weak transcription Esophagus oesophagus
3 chr9:72801000-72810200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr9:72802000-72811000 Weak transcription Pancreas Pancrea
5 chr9:72802000-72827000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr9:72802200-72820000 Weak transcription Fetal Lung lung
7 chr9:72803400-72810800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr9:72804600-72816200 Weak transcription Adipose Nuclei Adipose
9 chr9:72805200-72820200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr9:72806400-72819600 Weak transcription Liver Liver
11 chr9:72807600-72813800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr9:72807800-72812000 Strong transcription Stomach Smooth Muscle stomach
13 chr9:72808000-72810200 Weak transcription Aorta Aorta
14 chr9:72808000-72810600 Weak transcription Lung lung
15 chr9:72808000-72819600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr9:72808000-72819600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr9:72808000-72820000 Weak transcription HMEC breast
18 chr9:72808000-72820400 Weak transcription Left Ventricle heart
19 chr9:72808200-72810800 Strong transcription Colon Smooth Muscle Colon
20 chr9:72808200-72812200 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr9:72808200-72813000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr9:72808200-72820000 Weak transcription Placenta Amnion Placenta Amnion
23 chr9:72809000-72811400 Strong transcription Duodenum Smooth Muscle Duodenum
24 chr9:72809000-72813000 Strong transcription HSMMtube muscle
25 chr9:72809400-72810200 Weak transcription Ovary ovary
26 chr9:72809400-72820400 Weak transcription HSMM muscle
27 chr9:72809600-72837800 Weak transcription NH-A brain

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Last update: Aug 31, 2015