The 2.0 version of rSNPBase

Variant report

Variant rs11142380
Chromosome Location chr9:72978636-72978637
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72944000-72978800 Weak transcription Brain Inferior Temporal Lobe brain
2 chr9:72944000-73002600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr9:72948000-72983400 Weak transcription HSMMtube muscle
4 chr9:72948400-72980800 Weak transcription NHEK skin
5 chr9:72964200-72980800 Weak transcription Pancreas Pancrea
6 chr9:72965800-72979600 Weak transcription Placenta Amnion Placenta Amnion
7 chr9:72966600-72983000 Weak transcription NHDF-Ad bronchial
8 chr9:72967000-72980600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr9:72967200-72979000 Weak transcription Fetal Muscle Leg muscle
10 chr9:72967200-72980200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr9:72967400-72989600 Weak transcription Muscle Satellite Cultured Cells --
12 chr9:72967600-72979400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr9:72969000-72982800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr9:72971200-72982200 Weak transcription Psoas Muscle Psoas
15 chr9:72972800-72979200 Weak transcription Fetal Stomach stomach
16 chr9:72972800-72980000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr9:72972800-72981000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr9:72972800-72982800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr9:72972800-73002400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr9:72973000-72980600 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr9:72973200-72989600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr9:72973600-72979800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr9:72973600-72980200 Weak transcription Primary T cells from cord blood blood
24 chr9:72973800-72979000 Weak transcription Fetal Muscle Trunk muscle
25 chr9:72973800-72988800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr9:72974600-72979400 Weak transcription A549 lung
27 chr9:72978200-73001000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr9:72978400-72978800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr9:72978400-72978800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015