Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10825316	0.82[CHD][hapmap]
rs10825324	0.89[CHD][hapmap];0.89[MEX][hapmap]
rs11004277	0.84[MEX][hapmap]
rs11004281	1.00[CHD][hapmap];0.87[GIH][hapmap]
rs11004282	1.00[CHD][hapmap];0.87[GIH][hapmap]
rs11004283	0.84[GIH][hapmap]
rs11004284	1.00[CHD][hapmap];0.87[GIH][hapmap]
rs11004303	0.84[ASN][1000 genomes]
rs11597868	1.00[CHD][hapmap];0.89[GIH][hapmap];0.84[MEX][hapmap];0.81[TSI][hapmap];0.84[ASN][1000 genomes]
rs11598050	0.86[ASN][1000 genomes]
rs12146398	1.00[CHD][hapmap];0.87[GIH][hapmap]
rs1219862	0.82[CHD][hapmap]
rs12781673	0.84[ASN][1000 genomes]
rs12782473	0.84[ASN][1000 genomes]
rs1342310	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs1888972	1.00[CHD][hapmap];0.89[GIH][hapmap];0.95[MEX][hapmap];0.81[TSI][hapmap]
rs1888973	1.00[CHD][hapmap];0.89[GIH][hapmap];0.84[MEX][hapmap];0.81[TSI][hapmap];0.81[ASN][1000 genomes]
rs2151077	1.00[CHD][hapmap];0.89[GIH][hapmap]
rs2151078	1.00[CHD][hapmap];0.87[GIH][hapmap];0.84[MEX][hapmap]
rs2183973	1.00[CHD][hapmap];0.89[GIH][hapmap];0.84[MEX][hapmap]
rs2583026	0.82[CHD][hapmap]
rs2795918	0.82[CHD][hapmap]
rs2891523	1.00[CHD][hapmap];0.89[GIH][hapmap]
rs4935107	1.00[CHD][hapmap];0.87[GIH][hapmap]
rs66677889	0.84[ASN][1000 genomes]
rs67040242	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs7070060	1.00[CHD][hapmap];0.89[GIH][hapmap];0.84[MEX][hapmap]
rs7896552	0.89[CHD][hapmap];0.89[MEX][hapmap]
rs7915792	0.89[CHD][hapmap];0.89[MEX][hapmap]
rs981497	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044020	chr10:56038546-56224736	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv540634	chr10:56038546-56224736	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv831879	chr10:56059973-56210729	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv1052386	chr10:56075990-56273476	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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