Variant report

Variant	rs1935617
Chromosome Location	chr6:145943326-145943327
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:145873217..145875008-chr6:145943197..145945439,2	K562	blood:
2	chr6:145942233..145945341-chr6:145949543..145951828,3	K562	blood:

Extended variants
information (count: 125 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:125)

rs_ID	r²[population]
rs110289	0.88[EUR][1000 genomes]
rs12663211	0.83[EUR][1000 genomes]
rs1292335	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1292339	0.87[EUR][1000 genomes]
rs1355146	0.89[EUR][1000 genomes]
rs1396648	0.89[EUR][1000 genomes]
rs1883406	0.84[EUR][1000 genomes]
rs1883407	0.90[EUR][1000 genomes]
rs365515	0.89[EUR][1000 genomes]
rs365658	0.87[EUR][1000 genomes]
rs366621	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs367612	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs367643	0.81[EUR][1000 genomes]
rs368848	0.87[EUR][1000 genomes]
rs369214	0.87[EUR][1000 genomes]
rs372378	0.84[EUR][1000 genomes]
rs373313	0.87[EUR][1000 genomes]
rs373321	0.87[EUR][1000 genomes]
rs373527	0.88[EUR][1000 genomes]
rs373704	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs373778	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs374000	0.87[EUR][1000 genomes]
rs374464	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs374728	0.87[EUR][1000 genomes]
rs375873	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs376991	0.87[EUR][1000 genomes]
rs377130	0.87[EUR][1000 genomes]
rs377143	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs379164	0.87[EUR][1000 genomes]
rs380883	0.84[EUR][1000 genomes]
rs382910	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs384453	0.84[EUR][1000 genomes]
rs384519	0.86[EUR][1000 genomes]
rs385134	0.86[EUR][1000 genomes]
rs386344	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs386678	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs387965	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs388394	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs388728	0.83[EUR][1000 genomes]
rs390252	0.87[EUR][1000 genomes]
rs391524	0.84[EUR][1000 genomes]
rs391820	0.90[EUR][1000 genomes]
rs392014	0.93[EUR][1000 genomes]
rs395948	0.83[EUR][1000 genomes]
rs396492	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs396681	0.85[EUR][1000 genomes]
rs397311	0.81[EUR][1000 genomes]
rs397418	0.87[EUR][1000 genomes]
rs399089	0.87[EUR][1000 genomes]
rs400968	0.89[EUR][1000 genomes]
rs401888	0.87[EUR][1000 genomes]
rs404229	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs405622	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs406343	0.88[EUR][1000 genomes]
rs406799	0.84[EUR][1000 genomes]
rs407721	0.88[EUR][1000 genomes]
rs408768	0.88[EUR][1000 genomes]
rs411468	0.87[EUR][1000 genomes]
rs411641	0.87[EUR][1000 genomes]
rs413880	0.89[EUR][1000 genomes]
rs413916	0.87[EUR][1000 genomes]
rs414222	0.86[EUR][1000 genomes]
rs414646	0.87[EUR][1000 genomes]
rs415590	0.86[EUR][1000 genomes]
rs416243	0.88[EUR][1000 genomes]
rs416987	0.84[EUR][1000 genomes]
rs418662	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs419847	0.87[EUR][1000 genomes]
rs419850	0.87[EUR][1000 genomes]
rs419854	0.87[EUR][1000 genomes]
rs419991	0.88[EUR][1000 genomes]
rs421032	0.93[EUR][1000 genomes]
rs421268	0.86[EUR][1000 genomes]
rs421690	0.87[EUR][1000 genomes]
rs425731	0.87[EUR][1000 genomes]
rs428659	0.87[EUR][1000 genomes]
rs429306	0.87[EUR][1000 genomes]
rs430003	0.83[EUR][1000 genomes]
rs430248	0.87[EUR][1000 genomes]
rs430561	0.84[EUR][1000 genomes]
rs434298	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs436066	0.93[EUR][1000 genomes]
rs436212	0.86[EUR][1000 genomes]
rs4383831	0.84[EUR][1000 genomes]
rs439017	0.89[EUR][1000 genomes]
rs441364	0.94[EUR][1000 genomes]
rs441477	0.93[EUR][1000 genomes]
rs441575	0.85[EUR][1000 genomes]
rs442254	0.86[EUR][1000 genomes]
rs442435	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs444564	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs446242	0.87[EUR][1000 genomes]
rs447818	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs449377	0.87[EUR][1000 genomes]
rs450076	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs450973	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs451349	0.84[EUR][1000 genomes]
rs452552	0.84[EUR][1000 genomes]
rs452770	0.86[EUR][1000 genomes]
rs453609	0.84[EUR][1000 genomes]
rs454370	0.86[EUR][1000 genomes]
rs454614	0.87[EUR][1000 genomes]
rs455109	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4895678	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4896829	0.85[EUR][1000 genomes]
rs4896831	0.85[EUR][1000 genomes]
rs585292	0.87[EUR][1000 genomes]
rs636894	0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs640544	0.86[EUR][1000 genomes]
rs6570726	0.80[EUR][1000 genomes]
rs6903252	0.86[EUR][1000 genomes]
rs6918814	0.81[EUR][1000 genomes]
rs702313	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7772286	0.87[EUR][1000 genomes]
rs9376955	0.87[EUR][1000 genomes]
rs9390326	0.89[EUR][1000 genomes]
rs9390327	0.87[EUR][1000 genomes]
rs9390329	0.93[EUR][1000 genomes]
rs9399549	0.89[EUR][1000 genomes]
rs9403706	0.89[EUR][1000 genomes]
rs9403707	0.89[EUR][1000 genomes]
rs9484995	0.88[EUR][1000 genomes]
rs9497316	0.88[EUR][1000 genomes]
rs951143	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs973855	0.89[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:145924400-145948200	Weak transcription	Left Ventricle	heart
2	chr6:145934200-145948000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:145937600-145952000	Weak transcription	Psoas Muscle	Psoas
4	chr6:145938200-145943800	Weak transcription	Aorta	Aorta
5	chr6:145939800-145948400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr6:145941600-145954200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:145942400-145955400	Weak transcription	Esophagus	oesophagus
8	chr6:145942600-145943400	Enhancers	GM12878-XiMat	blood
9	chr6:145943200-145947800	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr6:145943200-145948200	Weak transcription	Fetal Stomach	stomach
11	chr6:145943200-145948200	Weak transcription	Pancreas	Pancrea

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