Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1055168	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs11786953	0.83[EUR][1000 genomes]
rs1478679	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1513520	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1513527	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs16892653	0.81[ASN][1000 genomes]
rs2279160	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs2927875	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2942849	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2942850	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2942854	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2954885	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2954900	0.85[EUR][1000 genomes]
rs4565485	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6469456	0.81[EUR][1000 genomes]
rs72673263	0.82[ASN][1000 genomes]
rs899299	0.82[EUR][1000 genomes]
rs922467	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs938248	0.85[EUR][1000 genomes]
rs9886503	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817379	chr8:114338391-115011632	Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv2754463	chr8:114353649-114501547	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv831429	chr8:114438561-114595565	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:114466800-114468000	Enhancers	GM12878-XiMat	blood
2	chr8:114467000-114467800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr8:114467000-114468000	Enhancers	Dnd41	blood

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