Variant report

Variant	rs1960774
Chromosome Location	chr11:45133968-45133969
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10444284	0.92[EUR][1000 genomes]
rs10742737	0.85[CHB][hapmap]
rs10742739	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10769119	0.94[AFR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10769120	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1077983	0.94[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs10838413	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10838415	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10838416	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10838417	0.99[ASN][1000 genomes]
rs10838418	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10838423	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11038299	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11038300	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11038304	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11038305	0.84[CHB][hapmap]
rs11038306	0.84[CHB][hapmap]
rs11038308	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11038316	0.96[AFR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11038317	0.96[AFR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11038319	0.96[AFR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11038331	0.92[EUR][1000 genomes]
rs11038332	0.92[CEU][hapmap];0.92[EUR][1000 genomes]
rs11038333	0.91[EUR][1000 genomes]
rs11038334	0.90[EUR][1000 genomes]
rs1116961	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1487718	0.96[CEU][hapmap];0.88[YRI][hapmap];0.90[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs1487720	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs1487721	0.92[CEU][hapmap];0.90[EUR][1000 genomes]
rs1586465	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1586466	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2278606	0.83[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs4282971	0.86[AFR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61585701	0.98[AFR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7107896	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs7124466	0.85[CHB][hapmap]
rs754839	0.92[CEU][hapmap];0.88[YRI][hapmap];0.94[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs7937556	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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