Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10154893	1.00[CEU][hapmap]
rs12108170	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1356925	1.00[CEU][hapmap]
rs1356926	1.00[CEU][hapmap]
rs1520697	0.87[EUR][1000 genomes]
rs1550218	1.00[CEU][hapmap]
rs16830461	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16830484	1.00[CEU][hapmap]
rs16830487	1.00[CEU][hapmap]
rs16830507	1.00[CEU][hapmap]
rs16830510	1.00[CEU][hapmap]
rs1978831	1.00[CEU][hapmap]
rs2118321	1.00[CEU][hapmap]
rs3930053	1.00[CEU][hapmap]
rs6769217	1.00[CEU][hapmap]
rs6796636	1.00[CEU][hapmap]
rs7619259	1.00[CEU][hapmap]
rs7625882	1.00[CEU][hapmap]
rs7629269	1.00[CEU][hapmap]
rs7636120	1.00[CEU][hapmap]
rs7650974	1.00[CEU][hapmap]
rs7653224	1.00[CEU][hapmap]
rs9290045	1.00[CEU][hapmap]
rs9817830	1.00[CEU][hapmap]
rs9829229	1.00[CEU][hapmap]
rs9833614	1.00[CEU][hapmap]
rs9833762	1.00[CEU][hapmap]
rs9840484	1.00[CEU][hapmap]
rs9860690	1.00[CEU][hapmap]
rs9866095	1.00[CEU][hapmap]
rs9881499	1.00[CEU][hapmap]
rs9882993	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
2	esv3692798	chr3:159269142-159302556	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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