Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1443259	0.96[EUR][1000 genomes]
rs1443262	0.85[EUR][1000 genomes]
rs1443263	0.88[EUR][1000 genomes]
rs1470294	1.00[EUR][1000 genomes]
rs1481	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1550646	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1808919	0.92[EUR][1000 genomes]
rs1838100	0.96[EUR][1000 genomes]
rs1838101	0.84[EUR][1000 genomes]
rs1867235	0.94[EUR][1000 genomes]
rs1899576	0.88[EUR][1000 genomes]
rs2083790	1.00[ASN][1000 genomes]
rs2363753	1.00[ASN][1000 genomes]
rs4556855	0.90[EUR][1000 genomes]
rs4968962	0.94[EUR][1000 genomes]
rs4968967	1.00[ASN][1000 genomes]
rs57304003	1.00[ASN][1000 genomes]
rs6501766	0.94[EUR][1000 genomes]
rs6501767	0.94[EUR][1000 genomes]
rs6501768	0.94[EUR][1000 genomes]
rs6501799	0.88[EUR][1000 genomes]
rs6501813	0.85[EUR][1000 genomes]
rs7216817	1.00[ASN][1000 genomes]
rs8074944	0.82[EUR][1000 genomes]
rs8078168	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8082619	0.97[EUR][1000 genomes]
rs894593	0.93[EUR][1000 genomes]
rs980423	0.99[EUR][1000 genomes]
rs9895868	0.94[EUR][1000 genomes]
rs9908305	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1067334	chr17:66695039-67221585	Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
2	nsv543411	chr17:66695039-67221585	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
3	nsv908694	chr17:66802992-66913936	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:66834400-66845800	Weak transcription	Fetal Muscle Trunk	muscle
2	chr17:66841000-66846000	Weak transcription	Fetal Lung	lung
3	chr17:66844400-66845600	Enhancers	HepG2	liver
4	chr17:66844600-66845600	Weak transcription	Fetal Muscle Leg	muscle
5	chr17:66844600-66845800	Weak transcription	Psoas Muscle	Psoas
6	chr17:66844600-66845800	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr17:66845400-66847000	Enhancers	Ovary	ovary

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