Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:54024735..54028634-chr5:54029831..54032905,3	K562	blood:
2	chr5:54017315..54018938-chr5:54030399..54032584,2	K562	blood:
3	chr5:53609481..53612376-chr5:54030629..54032657,2	K562	blood:

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10940420	0.95[CHB][hapmap]
rs10940421	0.90[CHB][hapmap]
rs12516090	0.82[AFR][1000 genomes]
rs12516335	0.83[AFR][1000 genomes]
rs12516850	0.83[AFR][1000 genomes]
rs12520102	0.94[CHB][hapmap]
rs1979009	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1979011	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2121132	0.82[AFR][1000 genomes]
rs35207106	0.81[ASN][1000 genomes]
rs4242043	0.81[ASN][1000 genomes]
rs4348178	0.83[AFR][1000 genomes]
rs4353983	0.83[AFR][1000 genomes]
rs4353984	0.83[AFR][1000 genomes]
rs4359998	0.84[AFR][1000 genomes]
rs4367252	0.81[ASN][1000 genomes]
rs4367253	0.81[ASN][1000 genomes]
rs4482860	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4485879	0.81[AFR][1000 genomes]
rs4588542	0.82[AFR][1000 genomes]
rs4596333	0.81[ASN][1000 genomes]
rs4604146	0.83[AFR][1000 genomes]
rs4639171	0.81[ASN][1000 genomes]
rs4865867	0.80[AFR][1000 genomes]
rs7701622	0.85[CHB][hapmap]
rs7710924	0.81[CHB][hapmap]
rs7735360	0.85[CHB][hapmap]
rs7735378	0.83[CHB][hapmap]
rs7736184	0.89[CHB][hapmap]
rs895329	0.81[ASN][1000 genomes]
rs973959	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs977207	0.81[AFR][1000 genomes]
rs977208	0.81[AFR][1000 genomes]
rs977209	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880717	chr5:54025701-54106378	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:54017000-54038000	Weak transcription	Aorta	Aorta
2	chr5:54027400-54035800	Weak transcription	Primary B cells from cord blood	blood
3	chr5:54031600-54032400	Enhancers	NHDF-Ad	bronchial
4	chr5:54031600-54032600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr5:54031600-54032600	Enhancers	Fetal Heart	heart
6	chr5:54031600-54032600	Flanking Active TSS	K562	blood
7	chr5:54031800-54032000	Enhancers	Right Ventricle	heart
8	chr5:54031800-54032600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr5:54031800-54032600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr5:54031800-54034200	Enhancers	Fetal Lung	lung

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