Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:102958971..102963759-chr8:102964426..102969369,7	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10089091	0.91[CEU][hapmap]
rs10090732	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs10091084	0.86[EUR][1000 genomes]
rs10102923	0.90[CEU][hapmap]
rs10105502	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs10505017	0.91[CEU][hapmap];0.81[TSI][hapmap]
rs1269711	0.91[CEU][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes]
rs1269712	0.82[EUR][1000 genomes]
rs16868893	0.91[CEU][hapmap];0.81[TSI][hapmap]
rs2023268	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs2023269	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs2387331	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs28680363	0.82[EUR][1000 genomes]
rs34417909	0.83[EUR][1000 genomes]
rs4145554	0.81[YRI][hapmap]
rs4734049	0.91[CEU][hapmap];0.83[EUR][1000 genomes]
rs4734050	0.91[CEU][hapmap];0.83[EUR][1000 genomes]
rs4734052	0.91[CEU][hapmap]
rs4734607	1.00[CEU][hapmap];0.90[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.86[EUR][1000 genomes]
rs4734609	0.91[CEU][hapmap]
rs55837041	0.81[EUR][1000 genomes]
rs6468809	0.91[CEU][hapmap];0.81[EUR][1000 genomes]
rs72679088	0.81[EUR][1000 genomes]
rs7814225	0.86[EUR][1000 genomes]
rs7814951	0.91[CEU][hapmap]
rs7837198	1.00[CEU][hapmap]
rs9297317	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes]
rs9656850	0.82[EUR][1000 genomes]
rs984928	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs9886578	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018653	chr8:102818271-103009082	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv539700	chr8:102818271-103009082	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv831411	chr8:102937991-103108140	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:102944400-102964000	Weak transcription	Stomach Smooth Muscle	stomach
2	chr8:102948600-102962600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:102951000-102961400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr8:102953600-102964800	Weak transcription	Ovary	ovary
5	chr8:102954600-102962800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr8:102957000-102962200	Weak transcription	Left Ventricle	heart
7	chr8:102957600-102970200	Weak transcription	Esophagus	oesophagus
8	chr8:102958000-102961400	Weak transcription	Fetal Heart	heart
9	chr8:102959000-102965400	Weak transcription	Colon Smooth Muscle	Colon
10	chr8:102959200-102960800	Weak transcription	Aorta	Aorta
11	chr8:102959400-102961400	Weak transcription	NHDF-Ad	bronchial
12	chr8:102959400-102963600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
13	chr8:102959600-102962400	Enhancers	K562	blood
14	chr8:102959800-102961600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr8:102960000-102962200	Weak transcription	Fetal Muscle Leg	muscle
16	chr8:102960000-102964400	Weak transcription	Fetal Muscle Trunk	muscle

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