The 2.0 version of rSNPBase

Variant report

Variant rs2016811
Chromosome Location chr4:77920033-77920034
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77903600-77936000 Weak transcription Esophagus oesophagus
2 chr4:77912600-77923000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr4:77914800-77923400 Weak transcription Brain Angular Gyrus brain
4 chr4:77915600-77924000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:77915600-77924000 Weak transcription Right Atrium heart
6 chr4:77915600-77936800 Weak transcription Brain Substantia Nigra brain
7 chr4:77915800-77922600 Weak transcription Psoas Muscle Psoas
8 chr4:77915800-77922800 Weak transcription Colon Smooth Muscle Colon
9 chr4:77915800-77923000 Weak transcription Small Intestine intestine
10 chr4:77915800-77923600 Weak transcription Right Ventricle heart
11 chr4:77916000-77928000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr4:77916200-77928200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr4:77916400-77920200 Genic enhancers HSMMtube muscle
14 chr4:77916600-77920400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr4:77916600-77922400 Genic enhancers NHLF lung
16 chr4:77916800-77920400 Genic enhancers Fetal Muscle Leg muscle
17 chr4:77916800-77921000 Strong transcription Duodenum Mucosa Duodenum
18 chr4:77916800-77921800 Strong transcription Muscle Satellite Cultured Cells --
19 chr4:77916800-77922400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr4:77916800-77922800 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr4:77917000-77920400 Strong transcription Colonic Mucosa Colon
22 chr4:77917000-77920400 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr4:77917000-77922200 Strong transcription HMEC breast
24 chr4:77917000-77922400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr4:77917000-77923000 Strong transcription Adipose Nuclei Adipose
26 chr4:77917200-77920200 Strong transcription Primary B cells from peripheral blood blood
27 chr4:77917200-77920200 Strong transcription HepG2 liver
28 chr4:77917200-77922200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr4:77917200-77922800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr4:77917400-77920200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr4:77917400-77920400 Strong transcription Duodenum Smooth Muscle Duodenum
32 chr4:77917400-77920400 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr4:77917400-77920400 Strong transcription Fetal Stomach stomach
34 chr4:77917400-77920400 Strong transcription NHEK skin
35 chr4:77917400-77921000 Strong transcription Sigmoid Colon Sigmoid Colon
36 chr4:77917400-77921600 Strong transcription Fetal Kidney kidney
37 chr4:77917400-77925400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr4:77917400-77928000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr4:77917400-77928000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr4:77917400-77928000 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr4:77917400-77928400 Strong transcription Fetal Muscle Trunk muscle
42 chr4:77917600-77920600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr4:77917600-77922200 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr4:77917600-77923200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr4:77917600-77924000 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr4:77917800-77920400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr4:77917800-77920400 Strong transcription GM12878-XiMat blood
48 chr4:77917800-77923000 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr4:77917800-77923200 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr4:77917800-77924600 Strong transcription Breast Myoepithelial Primary Cells Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015