The 2.0 version of rSNPBase

Variant report

Variant rs201898
Chromosome Location chr11:32628873-32628874
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:32609000-32629600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr11:32609400-32630200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr11:32616800-32631000 Weak transcription HSMMtube muscle
4 chr11:32617000-32632000 Weak transcription Gastric stomach
5 chr11:32618400-32630000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr11:32621000-32631600 Weak transcription Brain Hippocampus Middle brain
7 chr11:32621000-32631600 Weak transcription Psoas Muscle Psoas
8 chr11:32622600-32629800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr11:32622800-32629200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr11:32622800-32629200 Weak transcription Stomach Smooth Muscle stomach
11 chr11:32624600-32629600 Strong transcription Brain Germinal Matrix brain
12 chr11:32625000-32630000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr11:32625400-32637200 Weak transcription Fetal Heart heart
14 chr11:32625800-32634800 Weak transcription HepG2 liver
15 chr11:32626000-32629000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr11:32626000-32629200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr11:32626000-32629400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr11:32626000-32629400 Weak transcription Primary hematopoietic stem cells blood
19 chr11:32626000-32629400 Weak transcription Placenta Placenta
20 chr11:32626000-32629400 Weak transcription Ovary ovary
21 chr11:32626000-32629400 Weak transcription NHDF-Ad bronchial
22 chr11:32626000-32629600 Weak transcription H9 Cell Line embryonic stem cell
23 chr11:32626000-32629600 Weak transcription Lung lung
24 chr11:32626000-32629800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr11:32626000-32629800 Weak transcription Fetal Stomach stomach
26 chr11:32626000-32629800 Weak transcription Left Ventricle heart
27 chr11:32626000-32630000 Weak transcription Thymus Thymus
28 chr11:32626000-32631600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr11:32626200-32629000 Weak transcription NHEK skin
30 chr11:32626200-32629200 Weak transcription Primary B cells from peripheral blood blood
31 chr11:32626200-32629800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr11:32626200-32630000 Weak transcription Fetal Brain Female brain
33 chr11:32626200-32630800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr11:32626200-32631800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr11:32626600-32629000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr11:32626600-32629400 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr11:32626600-32632400 Weak transcription Fetal Kidney kidney
38 chr11:32626800-32629400 Weak transcription Fetal Intestine Small intestine
39 chr11:32627000-32629000 Weak transcription Fetal Lung lung
40 chr11:32627200-32629000 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr11:32627200-32631600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr11:32627200-32635000 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr11:32627400-32629000 Weak transcription Brain Substantia Nigra brain
44 chr11:32627400-32629200 Weak transcription Adipose Nuclei Adipose
45 chr11:32627400-32629400 Weak transcription Primary T cells fromperipheralblood blood
46 chr11:32627400-32629800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr11:32627400-32629800 Weak transcription Fetal Muscle Leg muscle
48 chr11:32627400-32630800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr11:32627400-32630800 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr11:32627400-32631000 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015